Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Lhx9Q9WUH2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.58■□□□□ 0.57
Lhx9Q9WUH2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx9Q9WUH2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx9Q9WUH2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx9Q9WUH2 Gm10849-201ENSMUST00000100397 618 ntBASIC18.58■□□□□ 0.56
Lhx9Q9WUH2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx9Q9WUH2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.57■□□□□ 0.56
Lhx9Q9WUH2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx9Q9WUH2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx9Q9WUH2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx9Q9WUH2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx9Q9WUH2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.57■□□□□ 0.56
Lhx9Q9WUH2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx9Q9WUH2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx9Q9WUH2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lhx9Q9WUH2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx9Q9WUH2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx9Q9WUH2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Lhx9Q9WUH2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.56■□□□□ 0.56
Lhx9Q9WUH2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx9Q9WUH2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lhx9Q9WUH2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lhx9Q9WUH2 Gm18671-201ENSMUST00000214826 683 ntBASIC18.54■□□□□ 0.56
Lhx9Q9WUH2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx9Q9WUH2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx9Q9WUH2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx9Q9WUH2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx9Q9WUH2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx9Q9WUH2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx9Q9WUH2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx9Q9WUH2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Lhx9Q9WUH2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx9Q9WUH2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx9Q9WUH2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx9Q9WUH2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx9Q9WUH2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx9Q9WUH2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx9Q9WUH2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx9Q9WUH2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx9Q9WUH2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx9Q9WUH2 AA386476-201ENSMUST00000098781 1665 ntBASIC18.53■□□□□ 0.56
Lhx9Q9WUH2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx9Q9WUH2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx9Q9WUH2 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.52■□□□□ 0.56
Lhx9Q9WUH2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx9Q9WUH2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx9Q9WUH2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Lhx9Q9WUH2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.52■□□□□ 0.56
Lhx9Q9WUH2 Gm42778-201ENSMUST00000199644 553 ntBASIC18.52■□□□□ 0.56
Lhx9Q9WUH2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx9Q9WUH2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx9Q9WUH2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Lhx9Q9WUH2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lhx9Q9WUH2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Lhx9Q9WUH2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx9Q9WUH2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Lhx9Q9WUH2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx9Q9WUH2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx9Q9WUH2 Gm37179-201ENSMUST00000194862 823 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms