Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ggps1Q9WTN0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ggps1Q9WTN0 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.65■■□□□ 1.06
Ggps1Q9WTN0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.65■■□□□ 1.06
Ggps1Q9WTN0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ggps1Q9WTN0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ggps1Q9WTN0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ggps1Q9WTN0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ggps1Q9WTN0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ggps1Q9WTN0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ggps1Q9WTN0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ggps1Q9WTN0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ggps1Q9WTN0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ggps1Q9WTN0 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.64■■□□□ 1.05
Ggps1Q9WTN0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ggps1Q9WTN0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.64■■□□□ 1.05
Ggps1Q9WTN0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ggps1Q9WTN0 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.64■■□□□ 1.05
Ggps1Q9WTN0 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.64■■□□□ 1.05
Ggps1Q9WTN0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
Ggps1Q9WTN0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ggps1Q9WTN0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ggps1Q9WTN0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ggps1Q9WTN0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ggps1Q9WTN0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ggps1Q9WTN0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ggps1Q9WTN0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.63■■□□□ 1.05
Ggps1Q9WTN0 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.63■■□□□ 1.05
Ggps1Q9WTN0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ggps1Q9WTN0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ggps1Q9WTN0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ggps1Q9WTN0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Ggps1Q9WTN0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Ggps1Q9WTN0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ggps1Q9WTN0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ggps1Q9WTN0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.62■■□□□ 1.05
Ggps1Q9WTN0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ggps1Q9WTN0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ggps1Q9WTN0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ggps1Q9WTN0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ggps1Q9WTN0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ggps1Q9WTN0 Mir5133-201ENSMUST00000174955 77 ntBASIC21.61■■□□□ 1.05
Ggps1Q9WTN0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.61■■□□□ 1.05
Ggps1Q9WTN0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ggps1Q9WTN0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ggps1Q9WTN0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ggps1Q9WTN0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ggps1Q9WTN0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ggps1Q9WTN0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.58■■□□□ 1.05
Ggps1Q9WTN0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.58■■□□□ 1.05
Ggps1Q9WTN0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ggps1Q9WTN0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Ggps1Q9WTN0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ggps1Q9WTN0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ggps1Q9WTN0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ggps1Q9WTN0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ggps1Q9WTN0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ggps1Q9WTN0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ggps1Q9WTN0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ggps1Q9WTN0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ggps1Q9WTN0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms