Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx5Q9JL61 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx5Q9JL61 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.66■□□□□ 0.9
Rfx5Q9JL61 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rfx5Q9JL61 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx5Q9JL61 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.66■□□□□ 0.9
Rfx5Q9JL61 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx5Q9JL61 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Rfx5Q9JL61 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rfx5Q9JL61 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx5Q9JL61 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rfx5Q9JL61 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.65■□□□□ 0.9
Rfx5Q9JL61 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.65■□□□□ 0.9
Rfx5Q9JL61 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx5Q9JL61 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rfx5Q9JL61 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx5Q9JL61 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx5Q9JL61 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx5Q9JL61 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx5Q9JL61 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx5Q9JL61 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx5Q9JL61 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx5Q9JL61 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx5Q9JL61 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx5Q9JL61 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.64■□□□□ 0.89
Rfx5Q9JL61 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.64■□□□□ 0.89
Rfx5Q9JL61 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.64■□□□□ 0.89
Rfx5Q9JL61 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx5Q9JL61 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx5Q9JL61 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rfx5Q9JL61 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx5Q9JL61 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx5Q9JL61 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx5Q9JL61 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx5Q9JL61 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.63■□□□□ 0.89
Rfx5Q9JL61 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx5Q9JL61 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rfx5Q9JL61 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx5Q9JL61 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx5Q9JL61 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx5Q9JL61 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.62■□□□□ 0.89
Rfx5Q9JL61 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx5Q9JL61 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rfx5Q9JL61 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.62■□□□□ 0.89
Rfx5Q9JL61 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx5Q9JL61 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx5Q9JL61 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx5Q9JL61 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx5Q9JL61 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.62■□□□□ 0.89
Rfx5Q9JL61 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx5Q9JL61 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx5Q9JL61 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx5Q9JL61 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rfx5Q9JL61 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx5Q9JL61 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rfx5Q9JL61 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx5Q9JL61 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx5Q9JL61 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx5Q9JL61 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx5Q9JL61 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx5Q9JL61 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.58■□□□□ 0.89
Rfx5Q9JL61 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rfx5Q9JL61 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Gm18284-201ENSMUST00000172604 624 ntBASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms