Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herpud2Q9JJC9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herpud2Q9JJC9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herpud2Q9JJC9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herpud2Q9JJC9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herpud2Q9JJC9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Herpud2Q9JJC9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herpud2Q9JJC9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Herpud2Q9JJC9 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.47■□□□□ 0.71
Herpud2Q9JJC9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herpud2Q9JJC9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herpud2Q9JJC9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Herpud2Q9JJC9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herpud2Q9JJC9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.47■□□□□ 0.71
Herpud2Q9JJC9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Gm27011-201ENSMUST00000182352 972 ntBASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herpud2Q9JJC9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Herpud2Q9JJC9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Herpud2Q9JJC9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Herpud2Q9JJC9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Herpud2Q9JJC9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.45■□□□□ 0.7
Herpud2Q9JJC9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Herpud2Q9JJC9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Herpud2Q9JJC9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Herpud2Q9JJC9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Herpud2Q9JJC9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Herpud2Q9JJC9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Herpud2Q9JJC9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Herpud2Q9JJC9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Herpud2Q9JJC9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Herpud2Q9JJC9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Herpud2Q9JJC9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Herpud2Q9JJC9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Herpud2Q9JJC9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Herpud2Q9JJC9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Herpud2Q9JJC9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.43■□□□□ 0.7
Herpud2Q9JJC9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Herpud2Q9JJC9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.43■□□□□ 0.7
Herpud2Q9JJC9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.43■□□□□ 0.7
Herpud2Q9JJC9 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.43■□□□□ 0.7
Herpud2Q9JJC9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Herpud2Q9JJC9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Herpud2Q9JJC9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.42■□□□□ 0.7
Herpud2Q9JJC9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Herpud2Q9JJC9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.42■□□□□ 0.7
Herpud2Q9JJC9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.42■□□□□ 0.7
Herpud2Q9JJC9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.42■□□□□ 0.7
Herpud2Q9JJC9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.42■□□□□ 0.7
Herpud2Q9JJC9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Herpud2Q9JJC9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Herpud2Q9JJC9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.41■□□□□ 0.7
Herpud2Q9JJC9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Gm7290-201ENSMUST00000104990 617 ntBASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Gm12918-201ENSMUST00000120234 636 ntBASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Gm15710-201ENSMUST00000121821 636 ntBASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Gm5075-201ENSMUST00000196916 622 ntBASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Herpud2Q9JJC9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.39■□□□□ 0.7
Herpud2Q9JJC9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms