Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.71■□□□□ 0.91
Rpf2Q9JJ80 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rpf2Q9JJ80 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpf2Q9JJ80 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.71■□□□□ 0.91
Rpf2Q9JJ80 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpf2Q9JJ80 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rpf2Q9JJ80 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.71■□□□□ 0.91
Rpf2Q9JJ80 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpf2Q9JJ80 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpf2Q9JJ80 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpf2Q9JJ80 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rpf2Q9JJ80 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rpf2Q9JJ80 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpf2Q9JJ80 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpf2Q9JJ80 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpf2Q9JJ80 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 BC021767-201ENSMUST00000126387 1716 ntBASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpf2Q9JJ80 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpf2Q9JJ80 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rpf2Q9JJ80 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpf2Q9JJ80 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.67■□□□□ 0.9
Rpf2Q9JJ80 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpf2Q9JJ80 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpf2Q9JJ80 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpf2Q9JJ80 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.67■□□□□ 0.9
Rpf2Q9JJ80 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rpf2Q9JJ80 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpf2Q9JJ80 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpf2Q9JJ80 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf2Q9JJ80 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf2Q9JJ80 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf2Q9JJ80 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Rpf2Q9JJ80 Gm7417-201ENSMUST00000192950 473 ntBASIC20.66■□□□□ 0.9
Rpf2Q9JJ80 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.66■□□□□ 0.9
Rpf2Q9JJ80 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf2Q9JJ80 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf2Q9JJ80 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf2Q9JJ80 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf2Q9JJ80 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf2Q9JJ80 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf2Q9JJ80 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.65■□□□□ 0.9
Rpf2Q9JJ80 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rpf2Q9JJ80 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf2Q9JJ80 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf2Q9JJ80 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rpf2Q9JJ80 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rpf2Q9JJ80 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpf2Q9JJ80 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpf2Q9JJ80 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.64■□□□□ 0.89
Rpf2Q9JJ80 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpf2Q9JJ80 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpf2Q9JJ80 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf2Q9JJ80 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf2Q9JJ80 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.62■□□□□ 0.89
Rpf2Q9JJ80 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf2Q9JJ80 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf2Q9JJ80 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf2Q9JJ80 Gm15820-201ENSMUST00000201566 728 ntBASIC20.62■□□□□ 0.89
Rpf2Q9JJ80 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.62■□□□□ 0.89
Rpf2Q9JJ80 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf2Q9JJ80 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf2Q9JJ80 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf2Q9JJ80 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms