Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Barx1Q9ER42 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Barx1Q9ER42 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Barx1Q9ER42 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Barx1Q9ER42 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Barx1Q9ER42 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Barx1Q9ER42 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Barx1Q9ER42 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Barx1Q9ER42 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Barx1Q9ER42 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.55■□□□□ 0.4
Barx1Q9ER42 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Barx1Q9ER42 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Barx1Q9ER42 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.55■□□□□ 0.4
Barx1Q9ER42 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.55■□□□□ 0.4
Barx1Q9ER42 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Barx1Q9ER42 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Barx1Q9ER42 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Barx1Q9ER42 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Barx1Q9ER42 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Barx1Q9ER42 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Barx1Q9ER42 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.54■□□□□ 0.4
Barx1Q9ER42 Gm5408-201ENSMUST00000197998 747 ntBASIC17.54■□□□□ 0.4
Barx1Q9ER42 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.54■□□□□ 0.4
Barx1Q9ER42 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Barx1Q9ER42 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Barx1Q9ER42 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Barx1Q9ER42 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Barx1Q9ER42 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Barx1Q9ER42 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Barx1Q9ER42 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Barx1Q9ER42 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Barx1Q9ER42 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Barx1Q9ER42 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Barx1Q9ER42 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Barx1Q9ER42 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Barx1Q9ER42 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Barx1Q9ER42 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Barx1Q9ER42 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Barx1Q9ER42 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Barx1Q9ER42 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.52■□□□□ 0.39
Barx1Q9ER42 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.52■□□□□ 0.39
Barx1Q9ER42 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Barx1Q9ER42 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Barx1Q9ER42 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Barx1Q9ER42 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.51■□□□□ 0.39
Barx1Q9ER42 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Barx1Q9ER42 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.51■□□□□ 0.39
Barx1Q9ER42 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Barx1Q9ER42 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Barx1Q9ER42 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Barx1Q9ER42 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Barx1Q9ER42 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Barx1Q9ER42 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Barx1Q9ER42 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Barx1Q9ER42 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Barx1Q9ER42 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Barx1Q9ER42 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.5■□□□□ 0.39
Barx1Q9ER42 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.5■□□□□ 0.39
Barx1Q9ER42 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Barx1Q9ER42 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Barx1Q9ER42 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Barx1Q9ER42 Gm12527-201ENSMUST00000117967 564 ntBASIC17.49■□□□□ 0.39
Barx1Q9ER42 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Barx1Q9ER42 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Barx1Q9ER42 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Barx1Q9ER42 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Barx1Q9ER42 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Barx1Q9ER42 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Barx1Q9ER42 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Barx1Q9ER42 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Barx1Q9ER42 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Barx1Q9ER42 Gm10252-201ENSMUST00000209541 832 ntBASIC17.48■□□□□ 0.39
Barx1Q9ER42 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Barx1Q9ER42 Gm6365-201ENSMUST00000054711 744 ntBASIC17.48■□□□□ 0.39
Barx1Q9ER42 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Barx1Q9ER42 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.47■□□□□ 0.39
Barx1Q9ER42 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Barx1Q9ER42 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Barx1Q9ER42 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Barx1Q9ER42 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.47■□□□□ 0.39
Barx1Q9ER42 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Barx1Q9ER42 Gm13146-201ENSMUST00000118508 780 ntBASIC17.47■□□□□ 0.39
Barx1Q9ER42 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.47■□□□□ 0.39
Barx1Q9ER42 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Barx1Q9ER42 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Barx1Q9ER42 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms