Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rsph9Q9D9V4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rsph9Q9D9V4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.06■□□□□ 0.64
Rsph9Q9D9V4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rsph9Q9D9V4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rsph9Q9D9V4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.05■□□□□ 0.64
Rsph9Q9D9V4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rsph9Q9D9V4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rsph9Q9D9V4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rsph9Q9D9V4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rsph9Q9D9V4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rsph9Q9D9V4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rsph9Q9D9V4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Rsph9Q9D9V4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rsph9Q9D9V4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rsph9Q9D9V4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rsph9Q9D9V4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rsph9Q9D9V4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rsph9Q9D9V4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rsph9Q9D9V4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Rsph9Q9D9V4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.03■□□□□ 0.64
Rsph9Q9D9V4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rsph9Q9D9V4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rsph9Q9D9V4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rsph9Q9D9V4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rsph9Q9D9V4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rsph9Q9D9V4 AV356131-201ENSMUST00000206201 750 ntBASIC19.03■□□□□ 0.64
Rsph9Q9D9V4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rsph9Q9D9V4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rsph9Q9D9V4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rsph9Q9D9V4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rsph9Q9D9V4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Gm9988-201ENSMUST00000069786 435 ntBASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph9Q9D9V4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rsph9Q9D9V4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
Rsph9Q9D9V4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph9Q9D9V4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph9Q9D9V4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph9Q9D9V4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Rsph9Q9D9V4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.01■□□□□ 0.63
Rsph9Q9D9V4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.01■□□□□ 0.63
Rsph9Q9D9V4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.01■□□□□ 0.63
Rsph9Q9D9V4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.01■□□□□ 0.63
Rsph9Q9D9V4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph9Q9D9V4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph9Q9D9V4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph9Q9D9V4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rsph9Q9D9V4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph9Q9D9V4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph9Q9D9V4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph9Q9D9V4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph9Q9D9V4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph9Q9D9V4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph9Q9D9V4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph9Q9D9V4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph9Q9D9V4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph9Q9D9V4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rsph9Q9D9V4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Rsph9Q9D9V4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms