Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rtl8cQ9D6I0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl8cQ9D6I0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rtl8cQ9D6I0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl8cQ9D6I0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl8cQ9D6I0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl8cQ9D6I0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl8cQ9D6I0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl8cQ9D6I0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl8cQ9D6I0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl8cQ9D6I0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl8cQ9D6I0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl8cQ9D6I0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.37■□□□□ 0.37
Rtl8cQ9D6I0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.37■□□□□ 0.37
Rtl8cQ9D6I0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl8cQ9D6I0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl8cQ9D6I0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.37■□□□□ 0.37
Rtl8cQ9D6I0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.37■□□□□ 0.37
Rtl8cQ9D6I0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl8cQ9D6I0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl8cQ9D6I0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl8cQ9D6I0 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.36■□□□□ 0.37
Rtl8cQ9D6I0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl8cQ9D6I0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Rtl8cQ9D6I0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.36■□□□□ 0.37
Rtl8cQ9D6I0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl8cQ9D6I0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl8cQ9D6I0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl8cQ9D6I0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl8cQ9D6I0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Spcs1-204ENSMUST00000226782 949 ntBASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rtl8cQ9D6I0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rtl8cQ9D6I0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Rtl8cQ9D6I0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtl8cQ9D6I0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtl8cQ9D6I0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rtl8cQ9D6I0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.33■□□□□ 0.37
Rtl8cQ9D6I0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtl8cQ9D6I0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtl8cQ9D6I0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.33■□□□□ 0.37
Rtl8cQ9D6I0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtl8cQ9D6I0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rtl8cQ9D6I0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rtl8cQ9D6I0 Gm43137-201ENSMUST00000198052 594 ntBASIC17.33■□□□□ 0.36
Rtl8cQ9D6I0 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.33■□□□□ 0.36
Rtl8cQ9D6I0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rtl8cQ9D6I0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtl8cQ9D6I0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtl8cQ9D6I0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Gm12821-201ENSMUST00000120022 600 ntBASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtl8cQ9D6I0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtl8cQ9D6I0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtl8cQ9D6I0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rtl8cQ9D6I0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtl8cQ9D6I0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.31■□□□□ 0.36
Rtl8cQ9D6I0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Rtl8cQ9D6I0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.31■□□□□ 0.36
Rtl8cQ9D6I0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtl8cQ9D6I0 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.31■□□□□ 0.36
Rtl8cQ9D6I0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtl8cQ9D6I0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtl8cQ9D6I0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtl8cQ9D6I0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rtl8cQ9D6I0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms