Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snrnp48Q9D361 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snrnp48Q9D361 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Snrnp48Q9D361 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
Snrnp48Q9D361 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snrnp48Q9D361 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.43■□□□□ 0.7
Snrnp48Q9D361 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snrnp48Q9D361 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.43■□□□□ 0.7
Snrnp48Q9D361 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snrnp48Q9D361 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snrnp48Q9D361 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Snrnp48Q9D361 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snrnp48Q9D361 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Snrnp48Q9D361 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snrnp48Q9D361 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Snrnp48Q9D361 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snrnp48Q9D361 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Snrnp48Q9D361 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Snrnp48Q9D361 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snrnp48Q9D361 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Snrnp48Q9D361 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snrnp48Q9D361 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snrnp48Q9D361 Smad6-203ENSMUST00000179458 273 ntBASIC19.41■□□□□ 0.7
Snrnp48Q9D361 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snrnp48Q9D361 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snrnp48Q9D361 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Snrnp48Q9D361 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snrnp48Q9D361 Iqck-206ENSMUST00000208658 2891 ntBASIC19.41■□□□□ 0.7
Snrnp48Q9D361 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snrnp48Q9D361 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snrnp48Q9D361 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.4■□□□□ 0.7
Snrnp48Q9D361 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.39■□□□□ 0.7
Snrnp48Q9D361 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Snrnp48Q9D361 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.39■□□□□ 0.69
Snrnp48Q9D361 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snrnp48Q9D361 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snrnp48Q9D361 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Snrnp48Q9D361 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snrnp48Q9D361 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Snrnp48Q9D361 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snrnp48Q9D361 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Snrnp48Q9D361 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Snrnp48Q9D361 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Snrnp48Q9D361 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Snrnp48Q9D361 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Snrnp48Q9D361 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snrnp48Q9D361 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snrnp48Q9D361 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snrnp48Q9D361 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Snrnp48Q9D361 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snrnp48Q9D361 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.37■□□□□ 0.69
Snrnp48Q9D361 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.37■□□□□ 0.69
Snrnp48Q9D361 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.37■□□□□ 0.69
Snrnp48Q9D361 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snrnp48Q9D361 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Snrnp48Q9D361 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snrnp48Q9D361 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snrnp48Q9D361 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snrnp48Q9D361 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Snrnp48Q9D361 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snrnp48Q9D361 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snrnp48Q9D361 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Snrnp48Q9D361 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snrnp48Q9D361 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Snrnp48Q9D361 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snrnp48Q9D361 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.36■□□□□ 0.69
Snrnp48Q9D361 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snrnp48Q9D361 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.35■□□□□ 0.69
Snrnp48Q9D361 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snrnp48Q9D361 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snrnp48Q9D361 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snrnp48Q9D361 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snrnp48Q9D361 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snrnp48Q9D361 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Snrnp48Q9D361 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snrnp48Q9D361 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms