Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.55■□□□□ 0.4
Mrps28Q9CY16 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.55■□□□□ 0.4
Mrps28Q9CY16 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrps28Q9CY16 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrps28Q9CY16 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.54■□□□□ 0.4
Mrps28Q9CY16 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrps28Q9CY16 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrps28Q9CY16 Gm12251-201ENSMUST00000117893 792 ntBASIC17.54■□□□□ 0.4
Mrps28Q9CY16 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mrps28Q9CY16 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.54■□□□□ 0.4
Mrps28Q9CY16 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrps28Q9CY16 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrps28Q9CY16 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mrps28Q9CY16 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Mrps28Q9CY16 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.53■□□□□ 0.4
Mrps28Q9CY16 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrps28Q9CY16 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Mrps28Q9CY16 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mrps28Q9CY16 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mrps28Q9CY16 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mrps28Q9CY16 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mrps28Q9CY16 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mrps28Q9CY16 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mrps28Q9CY16 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mrps28Q9CY16 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mrps28Q9CY16 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrps28Q9CY16 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mrps28Q9CY16 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrps28Q9CY16 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mrps28Q9CY16 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.5■□□□□ 0.39
Mrps28Q9CY16 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrps28Q9CY16 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.5■□□□□ 0.39
Mrps28Q9CY16 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mrps28Q9CY16 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Mrps28Q9CY16 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrps28Q9CY16 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Gm6139-201ENSMUST00000079261 882 ntBASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrps28Q9CY16 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Gm43173-201ENSMUST00000202246 593 ntBASIC17.48■□□□□ 0.39
Mrps28Q9CY16 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrps28Q9CY16 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrps28Q9CY16 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrps28Q9CY16 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mrps28Q9CY16 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrps28Q9CY16 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrps28Q9CY16 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrps28Q9CY16 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrps28Q9CY16 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrps28Q9CY16 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrps28Q9CY16 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms