Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx47Q9CWX9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.01■□□□□ 0.79
Ddx47Q9CWX9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx47Q9CWX9 Gm7143-201ENSMUST00000222811 859 ntBASIC20.01■□□□□ 0.79
Ddx47Q9CWX9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx47Q9CWX9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx47Q9CWX9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx47Q9CWX9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.01■□□□□ 0.79
Ddx47Q9CWX9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20■□□□□ 0.79
Ddx47Q9CWX9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx47Q9CWX9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx47Q9CWX9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Mir6236-201ENSMUST00000184437 123 ntBASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx47Q9CWX9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx47Q9CWX9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx47Q9CWX9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ddx47Q9CWX9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ddx47Q9CWX9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx47Q9CWX9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx47Q9CWX9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx47Q9CWX9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Ddx47Q9CWX9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx47Q9CWX9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx47Q9CWX9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx47Q9CWX9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx47Q9CWX9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx47Q9CWX9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx47Q9CWX9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx47Q9CWX9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx47Q9CWX9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx47Q9CWX9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx47Q9CWX9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ddx47Q9CWX9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ddx47Q9CWX9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx47Q9CWX9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx47Q9CWX9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx47Q9CWX9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx47Q9CWX9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx47Q9CWX9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx47Q9CWX9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ddx47Q9CWX9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx47Q9CWX9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx47Q9CWX9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms