Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc3Q9CWU5 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.63■□□□□ 0.57
Khdc3Q9CWU5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.63■□□□□ 0.57
Khdc3Q9CWU5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.63■□□□□ 0.57
Khdc3Q9CWU5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc3Q9CWU5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Khdc3Q9CWU5 Gm43137-201ENSMUST00000198052 594 ntBASIC18.63■□□□□ 0.57
Khdc3Q9CWU5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.63■□□□□ 0.57
Khdc3Q9CWU5 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.63■□□□□ 0.57
Khdc3Q9CWU5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Khdc3Q9CWU5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc3Q9CWU5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc3Q9CWU5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc3Q9CWU5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc3Q9CWU5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc3Q9CWU5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc3Q9CWU5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc3Q9CWU5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.61■□□□□ 0.57
Khdc3Q9CWU5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Khdc3Q9CWU5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc3Q9CWU5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc3Q9CWU5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc3Q9CWU5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.59■□□□□ 0.57
Khdc3Q9CWU5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Khdc3Q9CWU5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc3Q9CWU5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Khdc3Q9CWU5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Khdc3Q9CWU5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Khdc3Q9CWU5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Khdc3Q9CWU5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Khdc3Q9CWU5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Khdc3Q9CWU5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Khdc3Q9CWU5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Khdc3Q9CWU5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Khdc3Q9CWU5 Golph3-202ENSMUST00000226517 2359 ntBASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc3Q9CWU5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms