Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc40Q9CRC8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc40Q9CRC8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc40Q9CRC8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc40Q9CRC8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc40Q9CRC8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.3■□□□□ 0.68
Lrrc40Q9CRC8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc40Q9CRC8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc40Q9CRC8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc40Q9CRC8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lrrc40Q9CRC8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc40Q9CRC8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lrrc40Q9CRC8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc40Q9CRC8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc40Q9CRC8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc40Q9CRC8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc40Q9CRC8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc40Q9CRC8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc40Q9CRC8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrc40Q9CRC8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrc40Q9CRC8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrc40Q9CRC8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrc40Q9CRC8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lrrc40Q9CRC8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.28■□□□□ 0.68
Lrrc40Q9CRC8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrc40Q9CRC8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.27■□□□□ 0.68
Lrrc40Q9CRC8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrc40Q9CRC8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrc40Q9CRC8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lrrc40Q9CRC8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrc40Q9CRC8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.27■□□□□ 0.68
Lrrc40Q9CRC8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrc40Q9CRC8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrc40Q9CRC8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrc40Q9CRC8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrc40Q9CRC8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lrrc40Q9CRC8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Lrrc40Q9CRC8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.26■□□□□ 0.67
Lrrc40Q9CRC8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrc40Q9CRC8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lrrc40Q9CRC8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.26■□□□□ 0.67
Lrrc40Q9CRC8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.26■□□□□ 0.67
Lrrc40Q9CRC8 Serp2-204ENSMUST00000228055 705 ntBASIC19.26■□□□□ 0.67
Lrrc40Q9CRC8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrc40Q9CRC8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrc40Q9CRC8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrc40Q9CRC8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 Gm13241-201ENSMUST00000094493 780 ntBASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrc40Q9CRC8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Gm43137-201ENSMUST00000198052 594 ntBASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Spcs1-204ENSMUST00000226782 949 ntBASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrc40Q9CRC8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrc40Q9CRC8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrc40Q9CRC8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrc40Q9CRC8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrc40Q9CRC8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrc40Q9CRC8 Iqck-206ENSMUST00000208658 2891 ntBASIC19.22■□□□□ 0.67
Lrrc40Q9CRC8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrc40Q9CRC8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrc40Q9CRC8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrc40Q9CRC8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrc40Q9CRC8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms