Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh15Q99PJ1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Pcdh15Q99PJ1 Gm15565-201ENSMUST00000118890 427 ntBASIC22.54■■□□□ 1.2
Pcdh15Q99PJ1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh15Q99PJ1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.54■■□□□ 1.2
Pcdh15Q99PJ1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC22.54■■□□□ 1.2
Pcdh15Q99PJ1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh15Q99PJ1 Gm12896-201ENSMUST00000118430 226 ntBASIC22.53■■□□□ 1.2
Pcdh15Q99PJ1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC22.53■■□□□ 1.2
Pcdh15Q99PJ1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.53■■□□□ 1.2
Pcdh15Q99PJ1 Dio3-201ENSMUST00000097228 1449 ntBASIC22.53■■□□□ 1.2
Pcdh15Q99PJ1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdh15Q99PJ1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdh15Q99PJ1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.53■■□□□ 1.2
Pcdh15Q99PJ1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Pcdh15Q99PJ1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC22.52■■□□□ 1.2
Pcdh15Q99PJ1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.52■■□□□ 1.2
Pcdh15Q99PJ1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Pcdh15Q99PJ1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh15Q99PJ1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh15Q99PJ1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh15Q99PJ1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Pcdh15Q99PJ1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Pcdh15Q99PJ1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh15Q99PJ1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
Pcdh15Q99PJ1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Pcdh15Q99PJ1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh15Q99PJ1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC22.51■■□□□ 1.19
Pcdh15Q99PJ1 Gm6576-201ENSMUST00000169678 883 ntBASIC22.51■■□□□ 1.19
Pcdh15Q99PJ1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh15Q99PJ1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh15Q99PJ1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh15Q99PJ1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh15Q99PJ1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.51■■□□□ 1.19
Pcdh15Q99PJ1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh15Q99PJ1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC22.51■■□□□ 1.19
Pcdh15Q99PJ1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh15Q99PJ1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh15Q99PJ1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh15Q99PJ1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Pcdh15Q99PJ1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.49■■□□□ 1.19
Pcdh15Q99PJ1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh15Q99PJ1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh15Q99PJ1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh15Q99PJ1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh15Q99PJ1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Pcdh15Q99PJ1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh15Q99PJ1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdh15Q99PJ1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
Pcdh15Q99PJ1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdh15Q99PJ1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Pcdh15Q99PJ1 Gm10698-201ENSMUST00000182663 604 ntBASIC22.48■■□□□ 1.19
Pcdh15Q99PJ1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.48■■□□□ 1.19
Pcdh15Q99PJ1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.48■■□□□ 1.19
Pcdh15Q99PJ1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Pcdh15Q99PJ1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdh15Q99PJ1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 Gm37055-201ENSMUST00000191866 133 ntBASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh15Q99PJ1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh15Q99PJ1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh15Q99PJ1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh15Q99PJ1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.46■■□□□ 1.19
Pcdh15Q99PJ1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh15Q99PJ1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC22.46■■□□□ 1.19
Pcdh15Q99PJ1 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.46■■□□□ 1.19
Pcdh15Q99PJ1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh15Q99PJ1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh15Q99PJ1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh15Q99PJ1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Pcdh15Q99PJ1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Pcdh15Q99PJ1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Gm7860-201ENSMUST00000121190 879 ntBASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh15Q99PJ1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Pcdh15Q99PJ1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdh15Q99PJ1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdh15Q99PJ1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdh15Q99PJ1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdh15Q99PJ1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms