Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clcc1Q99LI2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clcc1Q99LI2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcc1Q99LI2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
Clcc1Q99LI2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.26■□□□□ 0.67
Clcc1Q99LI2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcc1Q99LI2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcc1Q99LI2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcc1Q99LI2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcc1Q99LI2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcc1Q99LI2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.25■□□□□ 0.67
Clcc1Q99LI2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcc1Q99LI2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcc1Q99LI2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcc1Q99LI2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcc1Q99LI2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcc1Q99LI2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcc1Q99LI2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcc1Q99LI2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 AV356131-201ENSMUST00000206201 750 ntBASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcc1Q99LI2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clcc1Q99LI2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.22■□□□□ 0.67
Clcc1Q99LI2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Clcc1Q99LI2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcc1Q99LI2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.22■□□□□ 0.67
Clcc1Q99LI2 Gm37179-201ENSMUST00000194862 823 ntBASIC19.22■□□□□ 0.67
Clcc1Q99LI2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcc1Q99LI2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcc1Q99LI2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcc1Q99LI2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcc1Q99LI2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcc1Q99LI2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcc1Q99LI2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcc1Q99LI2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcc1Q99LI2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcc1Q99LI2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Clcc1Q99LI2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Clcc1Q99LI2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcc1Q99LI2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcc1Q99LI2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcc1Q99LI2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcc1Q99LI2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.19■□□□□ 0.66
Clcc1Q99LI2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcc1Q99LI2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcc1Q99LI2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcc1Q99LI2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcc1Q99LI2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcc1Q99LI2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Clcc1Q99LI2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcc1Q99LI2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcc1Q99LI2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Reep4-203ENSMUST00000226563 1444 ntBASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Clcc1Q99LI2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms