Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cstf1Q99LC2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cstf1Q99LC2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cstf1Q99LC2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cstf1Q99LC2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cstf1Q99LC2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cstf1Q99LC2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cstf1Q99LC2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cstf1Q99LC2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cstf1Q99LC2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Cstf1Q99LC2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.45■□□□□ 0.7
Cstf1Q99LC2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cstf1Q99LC2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cstf1Q99LC2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cstf1Q99LC2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.45■□□□□ 0.7
Cstf1Q99LC2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cstf1Q99LC2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cstf1Q99LC2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Cstf1Q99LC2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.44■□□□□ 0.7
Cstf1Q99LC2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cstf1Q99LC2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cstf1Q99LC2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cstf1Q99LC2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cstf1Q99LC2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cstf1Q99LC2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cstf1Q99LC2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cstf1Q99LC2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cstf1Q99LC2 Gm7977-201ENSMUST00000193787 748 ntBASIC19.43■□□□□ 0.7
Cstf1Q99LC2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cstf1Q99LC2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cstf1Q99LC2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cstf1Q99LC2 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.43■□□□□ 0.7
Cstf1Q99LC2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cstf1Q99LC2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cstf1Q99LC2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cstf1Q99LC2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cstf1Q99LC2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cstf1Q99LC2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cstf1Q99LC2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cstf1Q99LC2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cstf1Q99LC2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cstf1Q99LC2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cstf1Q99LC2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cstf1Q99LC2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cstf1Q99LC2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cstf1Q99LC2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.41■□□□□ 0.7
Cstf1Q99LC2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cstf1Q99LC2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.41■□□□□ 0.7
Cstf1Q99LC2 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.41■□□□□ 0.7
Cstf1Q99LC2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cstf1Q99LC2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cstf1Q99LC2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cstf1Q99LC2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Cstf1Q99LC2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.4■□□□□ 0.7
Cstf1Q99LC2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cstf1Q99LC2 Gm37856-201ENSMUST00000191634 999 ntBASIC19.4■□□□□ 0.7
Cstf1Q99LC2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.4■□□□□ 0.7
Cstf1Q99LC2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cstf1Q99LC2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cstf1Q99LC2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cstf1Q99LC2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Gm6420-201ENSMUST00000193885 723 ntBASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cstf1Q99LC2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.38■□□□□ 0.69
Cstf1Q99LC2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cstf1Q99LC2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cstf1Q99LC2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cstf1Q99LC2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cstf1Q99LC2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cstf1Q99LC2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Cstf1Q99LC2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cstf1Q99LC2 Gm13146-201ENSMUST00000118508 780 ntBASIC19.37■□□□□ 0.69
Cstf1Q99LC2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cstf1Q99LC2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cstf1Q99LC2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cstf1Q99LC2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms