Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd1Q99J36 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd1Q99J36 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd1Q99J36 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd1Q99J36 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd1Q99J36 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd1Q99J36 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.3■□□□□ 0.36
Thumpd1Q99J36 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd1Q99J36 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Thumpd1Q99J36 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd1Q99J36 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd1Q99J36 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd1Q99J36 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Gm9870-201ENSMUST00000063874 645 ntBASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd1Q99J36 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thumpd1Q99J36 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Thumpd1Q99J36 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.28■□□□□ 0.36
Thumpd1Q99J36 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Thumpd1Q99J36 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.28■□□□□ 0.36
Thumpd1Q99J36 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.28■□□□□ 0.36
Thumpd1Q99J36 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Thumpd1Q99J36 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thumpd1Q99J36 AA386476-201ENSMUST00000098781 1665 ntBASIC17.28■□□□□ 0.36
Thumpd1Q99J36 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thumpd1Q99J36 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thumpd1Q99J36 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Thumpd1Q99J36 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Thumpd1Q99J36 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Thumpd1Q99J36 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Thumpd1Q99J36 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Thumpd1Q99J36 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Thumpd1Q99J36 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.27■□□□□ 0.36
Thumpd1Q99J36 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Thumpd1Q99J36 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Thumpd1Q99J36 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Thumpd1Q99J36 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.27■□□□□ 0.35
Thumpd1Q99J36 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Thumpd1Q99J36 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Thumpd1Q99J36 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.26■□□□□ 0.35
Thumpd1Q99J36 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd1Q99J36 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd1Q99J36 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms