Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Prdm9Q96EQ9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm9Q96EQ9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Reep4-203ENSMUST00000226563 1444 ntBASIC19.17■□□□□ 0.66
Prdm9Q96EQ9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 AV356131-201ENSMUST00000206201 750 ntBASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prdm9Q96EQ9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Gm13234-201ENSMUST00000120010 747 ntBASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Gm27405-201ENSMUST00000184201 112 ntBASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Gm7291-201ENSMUST00000199147 382 ntBASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Prdm9Q96EQ9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prdm9Q96EQ9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prdm9Q96EQ9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.14■□□□□ 0.65
Prdm9Q96EQ9 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.14■□□□□ 0.65
Prdm9Q96EQ9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Prdm9Q96EQ9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.14■□□□□ 0.65
Prdm9Q96EQ9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prdm9Q96EQ9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prdm9Q96EQ9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prdm9Q96EQ9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prdm9Q96EQ9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prdm9Q96EQ9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prdm9Q96EQ9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prdm9Q96EQ9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prdm9Q96EQ9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.12■□□□□ 0.65
Prdm9Q96EQ9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Prdm9Q96EQ9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms