Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp1aQ921W0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp1aQ921W0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp1aQ921W0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp1aQ921W0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.12■□□□□ 0.33
Chmp1aQ921W0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp1aQ921W0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chmp1aQ921W0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.12■□□□□ 0.33
Chmp1aQ921W0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp1aQ921W0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Chmp1aQ921W0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp1aQ921W0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp1aQ921W0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Chmp1aQ921W0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp1aQ921W0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp1aQ921W0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chmp1aQ921W0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp1aQ921W0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp1aQ921W0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp1aQ921W0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp1aQ921W0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp1aQ921W0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp1aQ921W0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp1aQ921W0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp1aQ921W0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp1aQ921W0 Gm7143-201ENSMUST00000222811 859 ntBASIC17.09■□□□□ 0.33
Chmp1aQ921W0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp1aQ921W0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp1aQ921W0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Chmp1aQ921W0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp1aQ921W0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chmp1aQ921W0 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.09■□□□□ 0.33
Chmp1aQ921W0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp1aQ921W0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp1aQ921W0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp1aQ921W0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp1aQ921W0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Chmp1aQ921W0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.08■□□□□ 0.32
Chmp1aQ921W0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.08■□□□□ 0.32
Chmp1aQ921W0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp1aQ921W0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp1aQ921W0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp1aQ921W0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp1aQ921W0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp1aQ921W0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp1aQ921W0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp1aQ921W0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Chmp1aQ921W0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Chmp1aQ921W0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp1aQ921W0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.07■□□□□ 0.32
Chmp1aQ921W0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp1aQ921W0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chmp1aQ921W0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp1aQ921W0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp1aQ921W0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp1aQ921W0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chmp1aQ921W0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp1aQ921W0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms