Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Pcdhga4Q91XY4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga4Q91XY4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga4Q91XY4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga4Q91XY4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhga4Q91XY4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhga4Q91XY4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga4Q91XY4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga4Q91XY4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Pcdhga4Q91XY4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga4Q91XY4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhga4Q91XY4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga4Q91XY4 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.01■□□□□ 0.63
Pcdhga4Q91XY4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhga4Q91XY4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga4Q91XY4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga4Q91XY4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga4Q91XY4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhga4Q91XY4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga4Q91XY4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga4Q91XY4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pcdhga4Q91XY4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19■□□□□ 0.63
Pcdhga4Q91XY4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga4Q91XY4 Snhg20-203ENSMUST00000182811 2153 ntBASIC19■□□□□ 0.63
Pcdhga4Q91XY4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga4Q91XY4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga4Q91XY4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.99■□□□□ 0.63
Pcdhga4Q91XY4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga4Q91XY4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga4Q91XY4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.98■□□□□ 0.63
Pcdhga4Q91XY4 Smad6-203ENSMUST00000179458 273 ntBASIC18.98■□□□□ 0.63
Pcdhga4Q91XY4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.98■□□□□ 0.63
Pcdhga4Q91XY4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga4Q91XY4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhga4Q91XY4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.98■□□□□ 0.63
Pcdhga4Q91XY4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pcdhga4Q91XY4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga4Q91XY4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.97■□□□□ 0.63
Pcdhga4Q91XY4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga4Q91XY4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga4Q91XY4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdhga4Q91XY4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdhga4Q91XY4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Pcdhga4Q91XY4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdhga4Q91XY4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Gm43060-201ENSMUST00000200621 289 ntBASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga4Q91XY4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms