Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga9Q91XX9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga9Q91XX9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga9Q91XX9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga9Q91XX9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga9Q91XX9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga9Q91XX9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga9Q91XX9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga9Q91XX9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga9Q91XX9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga9Q91XX9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga9Q91XX9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga9Q91XX9 Gm5874-201ENSMUST00000096101 508 ntBASIC19.24■□□□□ 0.67
Pcdhga9Q91XX9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga9Q91XX9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga9Q91XX9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga9Q91XX9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga9Q91XX9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga9Q91XX9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdhga9Q91XX9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga9Q91XX9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhga9Q91XX9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Gm26833-201ENSMUST00000180899 440 ntBASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhga9Q91XX9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga9Q91XX9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhga9Q91XX9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga9Q91XX9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga9Q91XX9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga9Q91XX9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdhga9Q91XX9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhga9Q91XX9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Pcdhga9Q91XX9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga9Q91XX9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga9Q91XX9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga9Q91XX9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga9Q91XX9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga9Q91XX9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga9Q91XX9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdhga9Q91XX9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga9Q91XX9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga9Q91XX9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga9Q91XX9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdhga9Q91XX9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
Pcdhga9Q91XX9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.18■□□□□ 0.66
Pcdhga9Q91XX9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga9Q91XX9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Pcdhga9Q91XX9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Pcdhga9Q91XX9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga9Q91XX9 Smad6-203ENSMUST00000179458 273 ntBASIC19.17■□□□□ 0.66
Pcdhga9Q91XX9 Gm43060-201ENSMUST00000200621 289 ntBASIC19.17■□□□□ 0.66
Pcdhga9Q91XX9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga9Q91XX9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga9Q91XX9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga9Q91XX9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga9Q91XX9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhga9Q91XX9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga9Q91XX9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhga9Q91XX9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms