Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx9Q91VH2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx9Q91VH2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx9Q91VH2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx9Q91VH2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.47■□□□□ 0.87
Snx9Q91VH2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx9Q91VH2 Gm5874-201ENSMUST00000096101 508 ntBASIC20.47■□□□□ 0.87
Snx9Q91VH2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Snx9Q91VH2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Snx9Q91VH2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snx9Q91VH2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snx9Q91VH2 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.46■□□□□ 0.87
Snx9Q91VH2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.46■□□□□ 0.87
Snx9Q91VH2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx9Q91VH2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx9Q91VH2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx9Q91VH2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Snx9Q91VH2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx9Q91VH2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx9Q91VH2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx9Q91VH2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx9Q91VH2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx9Q91VH2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Snx9Q91VH2 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.45■□□□□ 0.87
Snx9Q91VH2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Snx9Q91VH2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Snx9Q91VH2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx9Q91VH2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.45■□□□□ 0.86
Snx9Q91VH2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx9Q91VH2 Gm10493-201ENSMUST00000097270 612 ntBASIC20.45■□□□□ 0.86
Snx9Q91VH2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx9Q91VH2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx9Q91VH2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx9Q91VH2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snx9Q91VH2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snx9Q91VH2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.44■□□□□ 0.86
Snx9Q91VH2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.44■□□□□ 0.86
Snx9Q91VH2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.44■□□□□ 0.86
Snx9Q91VH2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snx9Q91VH2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snx9Q91VH2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.44■□□□□ 0.86
Snx9Q91VH2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snx9Q91VH2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snx9Q91VH2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snx9Q91VH2 Gm27801-201ENSMUST00000184174 223 ntBASIC20.43■□□□□ 0.86
Snx9Q91VH2 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.43■□□□□ 0.86
Snx9Q91VH2 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.43■□□□□ 0.86
Snx9Q91VH2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.43■□□□□ 0.86
Snx9Q91VH2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Snx9Q91VH2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx9Q91VH2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Snx9Q91VH2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Snx9Q91VH2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx9Q91VH2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx9Q91VH2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx9Q91VH2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx9Q91VH2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx9Q91VH2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx9Q91VH2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx9Q91VH2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx9Q91VH2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx9Q91VH2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx9Q91VH2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Snx9Q91VH2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx9Q91VH2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx9Q91VH2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Snx9Q91VH2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Snx9Q91VH2 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.41■□□□□ 0.86
Snx9Q91VH2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx9Q91VH2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx9Q91VH2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Snx9Q91VH2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Snx9Q91VH2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx9Q91VH2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.4■□□□□ 0.86
Snx9Q91VH2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
Snx9Q91VH2 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.4■□□□□ 0.86
Snx9Q91VH2 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.4■□□□□ 0.86
Snx9Q91VH2 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.4■□□□□ 0.86
Snx9Q91VH2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Snx9Q91VH2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx9Q91VH2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx9Q91VH2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx9Q91VH2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Snx9Q91VH2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Snx9Q91VH2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Snx9Q91VH2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.39■□□□□ 0.85
Snx9Q91VH2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.39■□□□□ 0.85
Snx9Q91VH2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Snx9Q91VH2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx9Q91VH2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx9Q91VH2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx9Q91VH2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx9Q91VH2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx9Q91VH2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx9Q91VH2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snx9Q91VH2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Snx9Q91VH2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.38■□□□□ 0.85
Snx9Q91VH2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snx9Q91VH2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snx9Q91VH2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms