Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb17Q91VD8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb17Q91VD8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb17Q91VD8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb17Q91VD8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb17Q91VD8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb17Q91VD8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhb17Q91VD8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb17Q91VD8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb17Q91VD8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb17Q91VD8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhb17Q91VD8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb17Q91VD8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.14■□□□□ 0.81
Pcdhb17Q91VD8 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC20.14■□□□□ 0.81
Pcdhb17Q91VD8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
Pcdhb17Q91VD8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb17Q91VD8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb17Q91VD8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb17Q91VD8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb17Q91VD8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhb17Q91VD8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhb17Q91VD8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhb17Q91VD8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb17Q91VD8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb17Q91VD8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb17Q91VD8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.12■□□□□ 0.81
Pcdhb17Q91VD8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb17Q91VD8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb17Q91VD8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.12■□□□□ 0.81
Pcdhb17Q91VD8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.12■□□□□ 0.81
Pcdhb17Q91VD8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb17Q91VD8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb17Q91VD8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb17Q91VD8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb17Q91VD8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb17Q91VD8 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC20.1■□□□□ 0.81
Pcdhb17Q91VD8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb17Q91VD8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhb17Q91VD8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhb17Q91VD8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb17Q91VD8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Pcdhb17Q91VD8 Gm27801-201ENSMUST00000184174 223 ntBASIC20.1■□□□□ 0.81
Pcdhb17Q91VD8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb17Q91VD8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb17Q91VD8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb17Q91VD8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb17Q91VD8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb17Q91VD8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhb17Q91VD8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb17Q91VD8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdhb17Q91VD8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhb17Q91VD8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb17Q91VD8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb17Q91VD8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb17Q91VD8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb17Q91VD8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb17Q91VD8 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.08■□□□□ 0.81
Pcdhb17Q91VD8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb17Q91VD8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb17Q91VD8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdhb17Q91VD8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdhb17Q91VD8 AC153937.1-201ENSMUST00000218734 412 ntBASIC20.07■□□□□ 0.8
Pcdhb17Q91VD8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb17Q91VD8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb17Q91VD8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb17Q91VD8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb17Q91VD8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb17Q91VD8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb17Q91VD8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb17Q91VD8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb17Q91VD8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb17Q91VD8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.06■□□□□ 0.8
Pcdhb17Q91VD8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Pcdhb17Q91VD8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb17Q91VD8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdhb17Q91VD8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhb17Q91VD8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb17Q91VD8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb17Q91VD8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb17Q91VD8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb17Q91VD8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb17Q91VD8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb17Q91VD8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb17Q91VD8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb17Q91VD8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb17Q91VD8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb17Q91VD8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb17Q91VD8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb17Q91VD8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms