Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb11Q91UZ8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb11Q91UZ8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb11Q91UZ8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb11Q91UZ8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.95■□□□□ 0.78
Pcdhb11Q91UZ8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb11Q91UZ8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb11Q91UZ8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb11Q91UZ8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Pcdhb11Q91UZ8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.94■□□□□ 0.78
Pcdhb11Q91UZ8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.94■□□□□ 0.78
Pcdhb11Q91UZ8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.94■□□□□ 0.78
Pcdhb11Q91UZ8 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.94■□□□□ 0.78
Pcdhb11Q91UZ8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb11Q91UZ8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb11Q91UZ8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb11Q91UZ8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb11Q91UZ8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.93■□□□□ 0.78
Pcdhb11Q91UZ8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Pcdhb11Q91UZ8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb11Q91UZ8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
Pcdhb11Q91UZ8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb11Q91UZ8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb11Q91UZ8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb11Q91UZ8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb11Q91UZ8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb11Q91UZ8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb11Q91UZ8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb11Q91UZ8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb11Q91UZ8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Pcdhb11Q91UZ8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb11Q91UZ8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb11Q91UZ8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb11Q91UZ8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.92■□□□□ 0.78
Pcdhb11Q91UZ8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb11Q91UZ8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb11Q91UZ8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb11Q91UZ8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.91■□□□□ 0.78
Pcdhb11Q91UZ8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb11Q91UZ8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb11Q91UZ8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb11Q91UZ8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb11Q91UZ8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.9■□□□□ 0.78
Pcdhb11Q91UZ8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.9■□□□□ 0.78
Pcdhb11Q91UZ8 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.9■□□□□ 0.78
Pcdhb11Q91UZ8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb11Q91UZ8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhb11Q91UZ8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb11Q91UZ8 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.9■□□□□ 0.78
Pcdhb11Q91UZ8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb11Q91UZ8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdhb11Q91UZ8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
Pcdhb11Q91UZ8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb11Q91UZ8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb11Q91UZ8 Gm26833-201ENSMUST00000180899 440 ntBASIC19.89■□□□□ 0.77
Pcdhb11Q91UZ8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb11Q91UZ8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdhb11Q91UZ8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb11Q91UZ8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb11Q91UZ8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb11Q91UZ8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhb11Q91UZ8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Pcdhb11Q91UZ8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdhb11Q91UZ8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb11Q91UZ8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhb11Q91UZ8 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Gm11421-201ENSMUST00000122124 294 ntBASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb11Q91UZ8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb11Q91UZ8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb11Q91UZ8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb11Q91UZ8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms