Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lmcd1Q8VEE1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lmcd1Q8VEE1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lmcd1Q8VEE1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lmcd1Q8VEE1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lmcd1Q8VEE1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Lmcd1Q8VEE1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Lmcd1Q8VEE1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Lmcd1Q8VEE1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.87■□□□□ 0.93
Lmcd1Q8VEE1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lmcd1Q8VEE1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lmcd1Q8VEE1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lmcd1Q8VEE1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lmcd1Q8VEE1 Gm12896-201ENSMUST00000118430 226 ntBASIC20.86■□□□□ 0.93
Lmcd1Q8VEE1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.86■□□□□ 0.93
Lmcd1Q8VEE1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lmcd1Q8VEE1 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.86■□□□□ 0.93
Lmcd1Q8VEE1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lmcd1Q8VEE1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lmcd1Q8VEE1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lmcd1Q8VEE1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.85■□□□□ 0.93
Lmcd1Q8VEE1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lmcd1Q8VEE1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.85■□□□□ 0.93
Lmcd1Q8VEE1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Gm15565-201ENSMUST00000118890 427 ntBASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lmcd1Q8VEE1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lmcd1Q8VEE1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lmcd1Q8VEE1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lmcd1Q8VEE1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lmcd1Q8VEE1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Lmcd1Q8VEE1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lmcd1Q8VEE1 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.83■□□□□ 0.92
Lmcd1Q8VEE1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Lmcd1Q8VEE1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lmcd1Q8VEE1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Lmcd1Q8VEE1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Lmcd1Q8VEE1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lmcd1Q8VEE1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lmcd1Q8VEE1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Lmcd1Q8VEE1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.82■□□□□ 0.92
Lmcd1Q8VEE1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Lmcd1Q8VEE1 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.82■□□□□ 0.92
Lmcd1Q8VEE1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lmcd1Q8VEE1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lmcd1Q8VEE1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lmcd1Q8VEE1 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.81■□□□□ 0.92
Lmcd1Q8VEE1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lmcd1Q8VEE1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lmcd1Q8VEE1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lmcd1Q8VEE1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lmcd1Q8VEE1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Lmcd1Q8VEE1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lmcd1Q8VEE1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lmcd1Q8VEE1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lmcd1Q8VEE1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
Lmcd1Q8VEE1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lmcd1Q8VEE1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lmcd1Q8VEE1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lmcd1Q8VEE1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Lmcd1Q8VEE1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.79■□□□□ 0.92
Lmcd1Q8VEE1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.79■□□□□ 0.92
Lmcd1Q8VEE1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lmcd1Q8VEE1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lmcd1Q8VEE1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lmcd1Q8VEE1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Lmcd1Q8VEE1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lmcd1Q8VEE1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lmcd1Q8VEE1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lmcd1Q8VEE1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lmcd1Q8VEE1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lmcd1Q8VEE1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
Lmcd1Q8VEE1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lmcd1Q8VEE1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lmcd1Q8VEE1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lmcd1Q8VEE1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lmcd1Q8VEE1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms