Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retreg1dQ8VE91 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg1dQ8VE91 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg1dQ8VE91 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg1dQ8VE91 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retreg1dQ8VE91 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg1dQ8VE91 Gm11421-201ENSMUST00000122124 294 ntBASIC19.16■□□□□ 0.66
Retreg1dQ8VE91 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg1dQ8VE91 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg1dQ8VE91 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg1dQ8VE91 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg1dQ8VE91 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Gm10493-201ENSMUST00000097270 612 ntBASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg1dQ8VE91 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg1dQ8VE91 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
Retreg1dQ8VE91 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.14■□□□□ 0.65
Retreg1dQ8VE91 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg1dQ8VE91 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg1dQ8VE91 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.14■□□□□ 0.65
Retreg1dQ8VE91 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg1dQ8VE91 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Golph3-202ENSMUST00000226517 2359 ntBASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg1dQ8VE91 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg1dQ8VE91 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg1dQ8VE91 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retreg1dQ8VE91 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms