Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20aQ8VDB9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20aQ8VDB9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20aQ8VDB9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20aQ8VDB9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.18■□□□□ 0.66
Slc6a20aQ8VDB9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Slc6a20aQ8VDB9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20aQ8VDB9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.18■□□□□ 0.66
Slc6a20aQ8VDB9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Slc6a20aQ8VDB9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.18■□□□□ 0.66
Slc6a20aQ8VDB9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20aQ8VDB9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20aQ8VDB9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Slc6a20aQ8VDB9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20aQ8VDB9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20aQ8VDB9 Gm43137-201ENSMUST00000198052 594 ntBASIC19.17■□□□□ 0.66
Slc6a20aQ8VDB9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20aQ8VDB9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20aQ8VDB9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20aQ8VDB9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20aQ8VDB9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20aQ8VDB9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.16■□□□□ 0.66
Slc6a20aQ8VDB9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20aQ8VDB9 Gm13241-201ENSMUST00000094493 780 ntBASIC19.16■□□□□ 0.66
Slc6a20aQ8VDB9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.16■□□□□ 0.66
Slc6a20aQ8VDB9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Slc6a20aQ8VDB9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Slc6a20aQ8VDB9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20aQ8VDB9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.15■□□□□ 0.66
Slc6a20aQ8VDB9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Slc6a20aQ8VDB9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20aQ8VDB9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20aQ8VDB9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20aQ8VDB9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Slc6a20aQ8VDB9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20aQ8VDB9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20aQ8VDB9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.14■□□□□ 0.65
Slc6a20aQ8VDB9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20aQ8VDB9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20aQ8VDB9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20aQ8VDB9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20aQ8VDB9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Slc6a20aQ8VDB9 Gm15039-201ENSMUST00000118914 875 ntBASIC19.13■□□□□ 0.65
Slc6a20aQ8VDB9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Slc6a20aQ8VDB9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a20aQ8VDB9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Slc6a20aQ8VDB9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Slc6a20aQ8VDB9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a20aQ8VDB9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Slc6a20aQ8VDB9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a20aQ8VDB9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a20aQ8VDB9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Serp2-204ENSMUST00000228055 705 ntBASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a20aQ8VDB9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Spcs1-204ENSMUST00000226782 949 ntBASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.11■□□□□ 0.65
Slc6a20aQ8VDB9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a20aQ8VDB9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Slc6a20aQ8VDB9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Slc6a20aQ8VDB9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Slc6a20aQ8VDB9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a20aQ8VDB9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a20aQ8VDB9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Slc6a20aQ8VDB9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a20aQ8VDB9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms