Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Lsm1Q8VC85 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.63■□□□□ 0.57
Lsm1Q8VC85 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
Lsm1Q8VC85 Golgb1-201ENSMUST00000023534 498 ntBASIC18.63■□□□□ 0.57
Lsm1Q8VC85 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm1Q8VC85 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.63■□□□□ 0.57
Lsm1Q8VC85 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm1Q8VC85 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm1Q8VC85 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm1Q8VC85 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.62■□□□□ 0.57
Lsm1Q8VC85 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.62■□□□□ 0.57
Lsm1Q8VC85 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Lsm1Q8VC85 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lsm1Q8VC85 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lsm1Q8VC85 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm1Q8VC85 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm1Q8VC85 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm1Q8VC85 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm1Q8VC85 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm1Q8VC85 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm1Q8VC85 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm1Q8VC85 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm1Q8VC85 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm1Q8VC85 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm1Q8VC85 Gm12922-201ENSMUST00000120626 809 ntBASIC18.58■□□□□ 0.56
Lsm1Q8VC85 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm1Q8VC85 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm1Q8VC85 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm1Q8VC85 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm1Q8VC85 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm1Q8VC85 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm1Q8VC85 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm1Q8VC85 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Lsm1Q8VC85 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm1Q8VC85 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lsm1Q8VC85 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm1Q8VC85 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm1Q8VC85 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.57■□□□□ 0.56
Lsm1Q8VC85 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.57■□□□□ 0.56
Lsm1Q8VC85 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm1Q8VC85 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.57■□□□□ 0.56
Lsm1Q8VC85 Golph3-205ENSMUST00000228671 2842 ntBASIC18.57■□□□□ 0.56
Lsm1Q8VC85 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm1Q8VC85 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm1Q8VC85 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm1Q8VC85 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm1Q8VC85 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm1Q8VC85 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.56■□□□□ 0.56
Lsm1Q8VC85 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
Lsm1Q8VC85 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm1Q8VC85 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm1Q8VC85 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms