Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Chrna3Q8R4G9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Chrna3Q8R4G9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna3Q8R4G9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna3Q8R4G9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna3Q8R4G9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna3Q8R4G9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna3Q8R4G9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna3Q8R4G9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chrna3Q8R4G9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chrna3Q8R4G9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chrna3Q8R4G9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chrna3Q8R4G9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.09■□□□□ 0.65
Chrna3Q8R4G9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.09■□□□□ 0.65
Chrna3Q8R4G9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chrna3Q8R4G9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chrna3Q8R4G9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chrna3Q8R4G9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.09■□□□□ 0.65
Chrna3Q8R4G9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.09■□□□□ 0.65
Chrna3Q8R4G9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chrna3Q8R4G9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chrna3Q8R4G9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Chrna3Q8R4G9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chrna3Q8R4G9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chrna3Q8R4G9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chrna3Q8R4G9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chrna3Q8R4G9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
Chrna3Q8R4G9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.08■□□□□ 0.64
Chrna3Q8R4G9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.08■□□□□ 0.64
Chrna3Q8R4G9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chrna3Q8R4G9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Chrna3Q8R4G9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Chrna3Q8R4G9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chrna3Q8R4G9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Chrna3Q8R4G9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chrna3Q8R4G9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.07■□□□□ 0.64
Chrna3Q8R4G9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chrna3Q8R4G9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chrna3Q8R4G9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chrna3Q8R4G9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chrna3Q8R4G9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Gm27801-201ENSMUST00000184174 223 ntBASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chrna3Q8R4G9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chrna3Q8R4G9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chrna3Q8R4G9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chrna3Q8R4G9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chrna3Q8R4G9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chrna3Q8R4G9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
Chrna3Q8R4G9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chrna3Q8R4G9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.05■□□□□ 0.64
Chrna3Q8R4G9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chrna3Q8R4G9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chrna3Q8R4G9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chrna3Q8R4G9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chrna3Q8R4G9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chrna3Q8R4G9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.03■□□□□ 0.64
Chrna3Q8R4G9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chrna3Q8R4G9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chrna3Q8R4G9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chrna3Q8R4G9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.03■□□□□ 0.64
Chrna3Q8R4G9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chrna3Q8R4G9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chrna3Q8R4G9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chrna3Q8R4G9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chrna3Q8R4G9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chrna3Q8R4G9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chrna3Q8R4G9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.02■□□□□ 0.64
Chrna3Q8R4G9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chrna3Q8R4G9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chrna3Q8R4G9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms