Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atp2a1Q8R429 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atp2a1Q8R429 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atp2a1Q8R429 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Atp2a1Q8R429 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Atp2a1Q8R429 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Atp2a1Q8R429 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Atp2a1Q8R429 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.78■■□□□ 1.08
Atp2a1Q8R429 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Atp2a1Q8R429 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atp2a1Q8R429 Reep4-203ENSMUST00000226563 1444 ntBASIC21.78■■□□□ 1.08
Atp2a1Q8R429 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atp2a1Q8R429 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atp2a1Q8R429 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Atp2a1Q8R429 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atp2a1Q8R429 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Atp2a1Q8R429 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Atp2a1Q8R429 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.76■■□□□ 1.07
Atp2a1Q8R429 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Atp2a1Q8R429 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atp2a1Q8R429 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Atp2a1Q8R429 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atp2a1Q8R429 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atp2a1Q8R429 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Atp2a1Q8R429 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atp2a1Q8R429 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.75■■□□□ 1.07
Atp2a1Q8R429 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atp2a1Q8R429 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Atp2a1Q8R429 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atp2a1Q8R429 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atp2a1Q8R429 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Atp2a1Q8R429 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atp2a1Q8R429 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atp2a1Q8R429 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atp2a1Q8R429 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atp2a1Q8R429 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atp2a1Q8R429 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atp2a1Q8R429 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atp2a1Q8R429 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.74■■□□□ 1.07
Atp2a1Q8R429 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atp2a1Q8R429 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Atp2a1Q8R429 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atp2a1Q8R429 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Atp2a1Q8R429 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atp2a1Q8R429 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp2a1Q8R429 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.71■■□□□ 1.07
Atp2a1Q8R429 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Atp2a1Q8R429 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp2a1Q8R429 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.71■■□□□ 1.07
Atp2a1Q8R429 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp2a1Q8R429 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp2a1Q8R429 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp2a1Q8R429 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp2a1Q8R429 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp2a1Q8R429 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Atp2a1Q8R429 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Atp2a1Q8R429 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Atp2a1Q8R429 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atp2a1Q8R429 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atp2a1Q8R429 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atp2a1Q8R429 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atp2a1Q8R429 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atp2a1Q8R429 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atp2a1Q8R429 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atp2a1Q8R429 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp2a1Q8R429 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Atp2a1Q8R429 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp2a1Q8R429 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Atp2a1Q8R429 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Atp2a1Q8R429 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp2a1Q8R429 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp2a1Q8R429 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp2a1Q8R429 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp2a1Q8R429 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Atp2a1Q8R429 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Atp2a1Q8R429 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms