Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxe1Q8R2I0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxe1Q8R2I0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxe1Q8R2I0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.26■□□□□ 0.83
Foxe1Q8R2I0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.26■□□□□ 0.83
Foxe1Q8R2I0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Gm27275-201ENSMUST00000184318 272 ntBASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.25■□□□□ 0.83
Foxe1Q8R2I0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Foxe1Q8R2I0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxe1Q8R2I0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxe1Q8R2I0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxe1Q8R2I0 Gm5643-201ENSMUST00000117081 966 ntBASIC20.24■□□□□ 0.83
Foxe1Q8R2I0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Foxe1Q8R2I0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxe1Q8R2I0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Foxe1Q8R2I0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxe1Q8R2I0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxe1Q8R2I0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.23■□□□□ 0.83
Foxe1Q8R2I0 Gm715-201ENSMUST00000117865 831 ntBASIC20.23■□□□□ 0.83
Foxe1Q8R2I0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxe1Q8R2I0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Foxe1Q8R2I0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Foxe1Q8R2I0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Foxe1Q8R2I0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.22■□□□□ 0.83
Foxe1Q8R2I0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.22■□□□□ 0.83
Foxe1Q8R2I0 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.22■□□□□ 0.83
Foxe1Q8R2I0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxe1Q8R2I0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxe1Q8R2I0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Foxe1Q8R2I0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.22■□□□□ 0.83
Foxe1Q8R2I0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxe1Q8R2I0 Gm11643-201ENSMUST00000119578 864 ntBASIC20.21■□□□□ 0.83
Foxe1Q8R2I0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.21■□□□□ 0.83
Foxe1Q8R2I0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Foxe1Q8R2I0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxe1Q8R2I0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxe1Q8R2I0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Foxe1Q8R2I0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxe1Q8R2I0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.2■□□□□ 0.82
Foxe1Q8R2I0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.2■□□□□ 0.82
Foxe1Q8R2I0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Foxe1Q8R2I0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.2■□□□□ 0.82
Foxe1Q8R2I0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxe1Q8R2I0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxe1Q8R2I0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Foxe1Q8R2I0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxe1Q8R2I0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Gm12896-201ENSMUST00000118430 226 ntBASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Foxe1Q8R2I0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.18■□□□□ 0.82
Foxe1Q8R2I0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxe1Q8R2I0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Foxe1Q8R2I0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxe1Q8R2I0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxe1Q8R2I0 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.17■□□□□ 0.82
Foxe1Q8R2I0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms