Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Sf3a1Q8K4Z5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.84■■□□□ 1.41
Sf3a1Q8K4Z5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sf3a1Q8K4Z5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sf3a1Q8K4Z5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sf3a1Q8K4Z5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.83■■□□□ 1.41
Sf3a1Q8K4Z5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Sf3a1Q8K4Z5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Sf3a1Q8K4Z5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Sf3a1Q8K4Z5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Sf3a1Q8K4Z5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sf3a1Q8K4Z5 Gm11421-201ENSMUST00000122124 294 ntBASIC23.82■■□□□ 1.4
Sf3a1Q8K4Z5 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.82■■□□□ 1.4
Sf3a1Q8K4Z5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sf3a1Q8K4Z5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sf3a1Q8K4Z5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sf3a1Q8K4Z5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
Sf3a1Q8K4Z5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sf3a1Q8K4Z5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.81■■□□□ 1.4
Sf3a1Q8K4Z5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sf3a1Q8K4Z5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Sf3a1Q8K4Z5 Gm40848-201ENSMUST00000221998 324 ntBASIC23.81■■□□□ 1.4
Sf3a1Q8K4Z5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sf3a1Q8K4Z5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sf3a1Q8K4Z5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sf3a1Q8K4Z5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sf3a1Q8K4Z5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sf3a1Q8K4Z5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Sf3a1Q8K4Z5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sf3a1Q8K4Z5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sf3a1Q8K4Z5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Sf3a1Q8K4Z5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sf3a1Q8K4Z5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sf3a1Q8K4Z5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Sf3a1Q8K4Z5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
Sf3a1Q8K4Z5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.79■■□□□ 1.4
Sf3a1Q8K4Z5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sf3a1Q8K4Z5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.79■■□□□ 1.4
Sf3a1Q8K4Z5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sf3a1Q8K4Z5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.78■■□□□ 1.4
Sf3a1Q8K4Z5 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.78■■□□□ 1.4
Sf3a1Q8K4Z5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sf3a1Q8K4Z5 Gm15039-201ENSMUST00000118914 875 ntBASIC23.78■■□□□ 1.4
Sf3a1Q8K4Z5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.78■■□□□ 1.4
Sf3a1Q8K4Z5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sf3a1Q8K4Z5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Sf3a1Q8K4Z5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sf3a1Q8K4Z5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sf3a1Q8K4Z5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Sf3a1Q8K4Z5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Sf3a1Q8K4Z5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sf3a1Q8K4Z5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sf3a1Q8K4Z5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sf3a1Q8K4Z5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Sf3a1Q8K4Z5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.77■■□□□ 1.4
Sf3a1Q8K4Z5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sf3a1Q8K4Z5 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.77■■□□□ 1.4
Sf3a1Q8K4Z5 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.77■■□□□ 1.4
Sf3a1Q8K4Z5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Sf3a1Q8K4Z5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sf3a1Q8K4Z5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sf3a1Q8K4Z5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sf3a1Q8K4Z5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Sf3a1Q8K4Z5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sf3a1Q8K4Z5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sf3a1Q8K4Z5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.76■■□□□ 1.39
Sf3a1Q8K4Z5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sf3a1Q8K4Z5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Sf3a1Q8K4Z5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.76■■□□□ 1.39
Sf3a1Q8K4Z5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Sf3a1Q8K4Z5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.75■■□□□ 1.39
Sf3a1Q8K4Z5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
Sf3a1Q8K4Z5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sf3a1Q8K4Z5 Gm43060-201ENSMUST00000200621 289 ntBASIC23.75■■□□□ 1.39
Sf3a1Q8K4Z5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.75■■□□□ 1.39
Sf3a1Q8K4Z5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sf3a1Q8K4Z5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sf3a1Q8K4Z5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sf3a1Q8K4Z5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.74■■□□□ 1.39
Sf3a1Q8K4Z5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sf3a1Q8K4Z5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sf3a1Q8K4Z5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sf3a1Q8K4Z5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sf3a1Q8K4Z5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sf3a1Q8K4Z5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sf3a1Q8K4Z5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.73■■□□□ 1.39
Sf3a1Q8K4Z5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sf3a1Q8K4Z5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sf3a1Q8K4Z5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sf3a1Q8K4Z5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Sf3a1Q8K4Z5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.72■■□□□ 1.39
Sf3a1Q8K4Z5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sf3a1Q8K4Z5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sf3a1Q8K4Z5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sf3a1Q8K4Z5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sf3a1Q8K4Z5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sf3a1Q8K4Z5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Sf3a1Q8K4Z5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Sf3a1Q8K4Z5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.71■■□□□ 1.39
Sf3a1Q8K4Z5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms