Protein–RNA interactions for Protein: Q8K2H2

Otud6b, OTU domain-containing protein 6B, mousemouse

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud6bQ8K2H2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Otud6bQ8K2H2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Otud6bQ8K2H2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Otud6bQ8K2H2 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.18■□□□□ 0.98
Otud6bQ8K2H2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Otud6bQ8K2H2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Otud6bQ8K2H2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Otud6bQ8K2H2 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.18■□□□□ 0.98
Otud6bQ8K2H2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Otud6bQ8K2H2 BC021767-201ENSMUST00000126387 1716 ntBASIC21.18■□□□□ 0.98
Otud6bQ8K2H2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otud6bQ8K2H2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otud6bQ8K2H2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otud6bQ8K2H2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otud6bQ8K2H2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.17■□□□□ 0.98
Otud6bQ8K2H2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Otud6bQ8K2H2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otud6bQ8K2H2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Otud6bQ8K2H2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otud6bQ8K2H2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Otud6bQ8K2H2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Otud6bQ8K2H2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otud6bQ8K2H2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Otud6bQ8K2H2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Otud6bQ8K2H2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Otud6bQ8K2H2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Otud6bQ8K2H2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Otud6bQ8K2H2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otud6bQ8K2H2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otud6bQ8K2H2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otud6bQ8K2H2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otud6bQ8K2H2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otud6bQ8K2H2 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.12■□□□□ 0.97
Otud6bQ8K2H2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Otud6bQ8K2H2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otud6bQ8K2H2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Otud6bQ8K2H2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otud6bQ8K2H2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otud6bQ8K2H2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otud6bQ8K2H2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms