Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim61Q8JZK6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim61Q8JZK6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim61Q8JZK6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim61Q8JZK6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim61Q8JZK6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim61Q8JZK6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Gm7514-201ENSMUST00000209475 934 ntBASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim61Q8JZK6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim61Q8JZK6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim61Q8JZK6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim61Q8JZK6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trim61Q8JZK6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim61Q8JZK6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim61Q8JZK6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trim61Q8JZK6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Trim61Q8JZK6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trim61Q8JZK6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim61Q8JZK6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.43■□□□□ 0.86
Trim61Q8JZK6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trim61Q8JZK6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trim61Q8JZK6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Trim61Q8JZK6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim61Q8JZK6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim61Q8JZK6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim61Q8JZK6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Trim61Q8JZK6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim61Q8JZK6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim61Q8JZK6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim61Q8JZK6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim61Q8JZK6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim61Q8JZK6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trim61Q8JZK6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim61Q8JZK6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trim61Q8JZK6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim61Q8JZK6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim61Q8JZK6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim61Q8JZK6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim61Q8JZK6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trim61Q8JZK6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.4■□□□□ 0.86
Trim61Q8JZK6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.4■□□□□ 0.86
Trim61Q8JZK6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim61Q8JZK6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim61Q8JZK6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim61Q8JZK6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.39■□□□□ 0.85
Trim61Q8JZK6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim61Q8JZK6 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.39■□□□□ 0.85
Trim61Q8JZK6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim61Q8JZK6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim61Q8JZK6 Golph3-202ENSMUST00000226517 2359 ntBASIC20.39■□□□□ 0.85
Trim61Q8JZK6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim61Q8JZK6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim61Q8JZK6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim61Q8JZK6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim61Q8JZK6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim61Q8JZK6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim61Q8JZK6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim61Q8JZK6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim61Q8JZK6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim61Q8JZK6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim61Q8JZK6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trim61Q8JZK6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim61Q8JZK6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim61Q8JZK6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms