Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
Pdlim5Q8CI51 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pdlim5Q8CI51 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim5Q8CI51 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pdlim5Q8CI51 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 AA386476-201ENSMUST00000098781 1665 ntBASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim5Q8CI51 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim5Q8CI51 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Pdlim5Q8CI51 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim5Q8CI51 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pdlim5Q8CI51 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim5Q8CI51 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pdlim5Q8CI51 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim5Q8CI51 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim5Q8CI51 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim5Q8CI51 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.85■□□□□ 0.45
Pdlim5Q8CI51 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim5Q8CI51 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim5Q8CI51 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Pdlim5Q8CI51 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim5Q8CI51 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Pdlim5Q8CI51 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim5Q8CI51 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pdlim5Q8CI51 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim5Q8CI51 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim5Q8CI51 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.84■□□□□ 0.45
Pdlim5Q8CI51 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim5Q8CI51 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.84■□□□□ 0.45
Pdlim5Q8CI51 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim5Q8CI51 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pdlim5Q8CI51 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim5Q8CI51 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pdlim5Q8CI51 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pdlim5Q8CI51 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim5Q8CI51 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.83■□□□□ 0.44
Pdlim5Q8CI51 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.83■□□□□ 0.44
Pdlim5Q8CI51 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim5Q8CI51 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim5Q8CI51 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.83■□□□□ 0.44
Pdlim5Q8CI51 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim5Q8CI51 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim5Q8CI51 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Pdlim5Q8CI51 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim5Q8CI51 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim5Q8CI51 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim5Q8CI51 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim5Q8CI51 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms