Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PdgfcQ8CI19 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PdgfcQ8CI19 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PdgfcQ8CI19 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PdgfcQ8CI19 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PdgfcQ8CI19 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PdgfcQ8CI19 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PdgfcQ8CI19 Gm13534-201ENSMUST00000121169 513 ntBASIC21.58■■□□□ 1.05
PdgfcQ8CI19 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.58■■□□□ 1.05
PdgfcQ8CI19 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PdgfcQ8CI19 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PdgfcQ8CI19 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PdgfcQ8CI19 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PdgfcQ8CI19 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PdgfcQ8CI19 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PdgfcQ8CI19 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PdgfcQ8CI19 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.57■■□□□ 1.04
PdgfcQ8CI19 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PdgfcQ8CI19 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.57■■□□□ 1.04
PdgfcQ8CI19 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PdgfcQ8CI19 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PdgfcQ8CI19 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Gm5408-201ENSMUST00000197998 747 ntBASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfcQ8CI19 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PdgfcQ8CI19 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PdgfcQ8CI19 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PdgfcQ8CI19 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PdgfcQ8CI19 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PdgfcQ8CI19 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PdgfcQ8CI19 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PdgfcQ8CI19 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.54■■□□□ 1.04
PdgfcQ8CI19 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.54■■□□□ 1.04
PdgfcQ8CI19 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.54■■□□□ 1.04
PdgfcQ8CI19 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.54■■□□□ 1.04
PdgfcQ8CI19 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.54■■□□□ 1.04
PdgfcQ8CI19 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PdgfcQ8CI19 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Gm7290-201ENSMUST00000104990 617 ntBASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Gm12918-201ENSMUST00000120234 636 ntBASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Gm15710-201ENSMUST00000121821 636 ntBASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Gm5075-201ENSMUST00000196916 622 ntBASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PdgfcQ8CI19 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PdgfcQ8CI19 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.52■■□□□ 1.04
PdgfcQ8CI19 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PdgfcQ8CI19 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PdgfcQ8CI19 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PdgfcQ8CI19 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PdgfcQ8CI19 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PdgfcQ8CI19 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PdgfcQ8CI19 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
PdgfcQ8CI19 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PdgfcQ8CI19 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PdgfcQ8CI19 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PdgfcQ8CI19 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.51■■□□□ 1.03
PdgfcQ8CI19 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PdgfcQ8CI19 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
PdgfcQ8CI19 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PdgfcQ8CI19 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.5■■□□□ 1.03
PdgfcQ8CI19 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PdgfcQ8CI19 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PdgfcQ8CI19 Gm22240-201ENSMUST00000175225 82 ntBASIC21.5■■□□□ 1.03
PdgfcQ8CI19 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PdgfcQ8CI19 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
PdgfcQ8CI19 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PdgfcQ8CI19 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PdgfcQ8CI19 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PdgfcQ8CI19 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PdgfcQ8CI19 Gm20760-201ENSMUST00000179197 648 ntBASIC21.49■■□□□ 1.03
PdgfcQ8CI19 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PdgfcQ8CI19 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PdgfcQ8CI19 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms