Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist3h2bbQ8CGP0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hist3h2bbQ8CGP0 Gm16148-201ENSMUST00000119653 893 ntBASIC14.83□□□□□ -0.04
Hist3h2bbQ8CGP0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hist3h2bbQ8CGP0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist3h2bbQ8CGP0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist3h2bbQ8CGP0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hist3h2bbQ8CGP0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hist3h2bbQ8CGP0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hist3h2bbQ8CGP0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist3h2bbQ8CGP0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hist3h2bbQ8CGP0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Hist3h2bbQ8CGP0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist3h2bbQ8CGP0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist3h2bbQ8CGP0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hist3h2bbQ8CGP0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Hist3h2bbQ8CGP0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist3h2bbQ8CGP0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist3h2bbQ8CGP0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hist3h2bbQ8CGP0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist3h2bbQ8CGP0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist3h2bbQ8CGP0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist3h2bbQ8CGP0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist3h2bbQ8CGP0 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.79□□□□□ -0.04
Hist3h2bbQ8CGP0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist3h2bbQ8CGP0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist3h2bbQ8CGP0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms