Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc28bQ8CEG5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc28bQ8CEG5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc28bQ8CEG5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc28bQ8CEG5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc28bQ8CEG5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc28bQ8CEG5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc28bQ8CEG5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc28bQ8CEG5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc28bQ8CEG5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc28bQ8CEG5 Mir6236-201ENSMUST00000184437 123 ntBASIC19.18■□□□□ 0.66
Ccdc28bQ8CEG5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc28bQ8CEG5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc28bQ8CEG5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc28bQ8CEG5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc28bQ8CEG5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc28bQ8CEG5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc28bQ8CEG5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc28bQ8CEG5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc28bQ8CEG5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc28bQ8CEG5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.17■□□□□ 0.66
Ccdc28bQ8CEG5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc28bQ8CEG5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 Gm43566-201ENSMUST00000196851 808 ntBASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc28bQ8CEG5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28bQ8CEG5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28bQ8CEG5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc28bQ8CEG5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc28bQ8CEG5 Gm13238-201ENSMUST00000117655 780 ntBASIC19.15■□□□□ 0.66
Ccdc28bQ8CEG5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc28bQ8CEG5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28bQ8CEG5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.15■□□□□ 0.66
Ccdc28bQ8CEG5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc28bQ8CEG5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc28bQ8CEG5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc28bQ8CEG5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc28bQ8CEG5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc28bQ8CEG5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Ccdc28bQ8CEG5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28bQ8CEG5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28bQ8CEG5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.14■□□□□ 0.65
Ccdc28bQ8CEG5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28bQ8CEG5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.14■□□□□ 0.65
Ccdc28bQ8CEG5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28bQ8CEG5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28bQ8CEG5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28bQ8CEG5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc28bQ8CEG5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28bQ8CEG5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28bQ8CEG5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc28bQ8CEG5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc28bQ8CEG5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28bQ8CEG5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28bQ8CEG5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28bQ8CEG5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28bQ8CEG5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 205 ms