Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc46a2Q8CA03 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.66■□□□□ 0.58
Slc46a2Q8CA03 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Slc46a2Q8CA03 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc46a2Q8CA03 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc46a2Q8CA03 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc46a2Q8CA03 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc46a2Q8CA03 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc46a2Q8CA03 AA386476-201ENSMUST00000098781 1665 ntBASIC18.66■□□□□ 0.58
Slc46a2Q8CA03 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
Slc46a2Q8CA03 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc46a2Q8CA03 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc46a2Q8CA03 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Gm40881-201ENSMUST00000223397 166 ntBASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc46a2Q8CA03 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Slc46a2Q8CA03 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.62■□□□□ 0.57
Slc46a2Q8CA03 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Gm9870-201ENSMUST00000063874 645 ntBASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc46a2Q8CA03 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms