Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Eri3Q8C460 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Eri3Q8C460 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.5■□□□□ 0.55
Eri3Q8C460 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Eri3Q8C460 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Eri3Q8C460 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Eri3Q8C460 Gm43017-201ENSMUST00000198296 752 ntBASIC18.49■□□□□ 0.55
Eri3Q8C460 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Eri3Q8C460 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Eri3Q8C460 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Eri3Q8C460 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.49■□□□□ 0.55
Eri3Q8C460 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Eri3Q8C460 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Eri3Q8C460 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Eri3Q8C460 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Eri3Q8C460 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Eri3Q8C460 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Eri3Q8C460 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Eri3Q8C460 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Eri3Q8C460 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Eri3Q8C460 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Eri3Q8C460 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.48■□□□□ 0.55
Eri3Q8C460 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Eri3Q8C460 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Eri3Q8C460 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.48■□□□□ 0.55
Eri3Q8C460 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.48■□□□□ 0.55
Eri3Q8C460 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Eri3Q8C460 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Eri3Q8C460 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Eri3Q8C460 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Eri3Q8C460 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Eri3Q8C460 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Eri3Q8C460 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Eri3Q8C460 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Eri3Q8C460 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Eri3Q8C460 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Eri3Q8C460 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
Eri3Q8C460 Smad6-203ENSMUST00000179458 273 ntBASIC18.47■□□□□ 0.55
Eri3Q8C460 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.47■□□□□ 0.55
Eri3Q8C460 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Eri3Q8C460 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Eri3Q8C460 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Eri3Q8C460 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Eri3Q8C460 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Eri3Q8C460 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Eri3Q8C460 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Eri3Q8C460 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Eri3Q8C460 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Eri3Q8C460 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.46■□□□□ 0.55
Eri3Q8C460 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Eri3Q8C460 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Eri3Q8C460 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Eri3Q8C460 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Eri3Q8C460 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Eri3Q8C460 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Eri3Q8C460 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Eri3Q8C460 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Eri3Q8C460 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Eri3Q8C460 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Eri3Q8C460 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Eri3Q8C460 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Eri3Q8C460 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Eri3Q8C460 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.45■□□□□ 0.54
Eri3Q8C460 Serp2-204ENSMUST00000228055 705 ntBASIC18.45■□□□□ 0.54
Eri3Q8C460 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Eri3Q8C460 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Eri3Q8C460 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Eri3Q8C460 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Eri3Q8C460 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Eri3Q8C460 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Eri3Q8C460 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Eri3Q8C460 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Eri3Q8C460 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Eri3Q8C460 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Eri3Q8C460 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.44■□□□□ 0.54
Eri3Q8C460 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Eri3Q8C460 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Eri3Q8C460 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Eri3Q8C460 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Eri3Q8C460 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Eri3Q8C460 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Eri3Q8C460 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Eri3Q8C460 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.43■□□□□ 0.54
Eri3Q8C460 Gm11421-201ENSMUST00000122124 294 ntBASIC18.43■□□□□ 0.54
Eri3Q8C460 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.43■□□□□ 0.54
Eri3Q8C460 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Eri3Q8C460 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Eri3Q8C460 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Eri3Q8C460 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.43■□□□□ 0.54
Eri3Q8C460 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Eri3Q8C460 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.43■□□□□ 0.54
Eri3Q8C460 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Eri3Q8C460 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Eri3Q8C460 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Eri3Q8C460 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Eri3Q8C460 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Eri3Q8C460 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.42■□□□□ 0.54
Eri3Q8C460 Gm26833-201ENSMUST00000180899 440 ntBASIC18.42■□□□□ 0.54
Eri3Q8C460 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.42■□□□□ 0.54
Eri3Q8C460 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms