Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc90bQ8C3X2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc90bQ8C3X2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc90bQ8C3X2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Gm45444-201ENSMUST00000211394 898 ntBASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc90bQ8C3X2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc90bQ8C3X2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccdc90bQ8C3X2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc90bQ8C3X2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc90bQ8C3X2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc90bQ8C3X2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc90bQ8C3X2 Gm7143-201ENSMUST00000222811 859 ntBASIC18.78■□□□□ 0.6
Ccdc90bQ8C3X2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ccdc90bQ8C3X2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc90bQ8C3X2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc90bQ8C3X2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc90bQ8C3X2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc90bQ8C3X2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc90bQ8C3X2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc90bQ8C3X2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc90bQ8C3X2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc90bQ8C3X2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc90bQ8C3X2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc90bQ8C3X2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc90bQ8C3X2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc90bQ8C3X2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc90bQ8C3X2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.77■□□□□ 0.59
Ccdc90bQ8C3X2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc90bQ8C3X2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ccdc90bQ8C3X2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.76■□□□□ 0.59
Ccdc90bQ8C3X2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc90bQ8C3X2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc90bQ8C3X2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc90bQ8C3X2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc90bQ8C3X2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc90bQ8C3X2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc90bQ8C3X2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc90bQ8C3X2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.75■□□□□ 0.59
Ccdc90bQ8C3X2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc90bQ8C3X2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc90bQ8C3X2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc90bQ8C3X2 Mir6236-201ENSMUST00000184437 123 ntBASIC18.75■□□□□ 0.59
Ccdc90bQ8C3X2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc90bQ8C3X2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc90bQ8C3X2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc90bQ8C3X2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc90bQ8C3X2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Mir6538-201ENSMUST00000183713 110 ntBASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc90bQ8C3X2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc90bQ8C3X2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms