Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brat1Q8C3R1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Brat1Q8C3R1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brat1Q8C3R1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.56■□□□□ 0.88
Brat1Q8C3R1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brat1Q8C3R1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.56■□□□□ 0.88
Brat1Q8C3R1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Brat1Q8C3R1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Brat1Q8C3R1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Brat1Q8C3R1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Brat1Q8C3R1 Gm18284-201ENSMUST00000172604 624 ntBASIC20.54■□□□□ 0.88
Brat1Q8C3R1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Brat1Q8C3R1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Brat1Q8C3R1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Brat1Q8C3R1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Brat1Q8C3R1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Brat1Q8C3R1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Brat1Q8C3R1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.53■□□□□ 0.88
Brat1Q8C3R1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Brat1Q8C3R1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Brat1Q8C3R1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Brat1Q8C3R1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Brat1Q8C3R1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Brat1Q8C3R1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.53■□□□□ 0.88
Brat1Q8C3R1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.52■□□□□ 0.88
Brat1Q8C3R1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Brat1Q8C3R1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.52■□□□□ 0.88
Brat1Q8C3R1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Brat1Q8C3R1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Brat1Q8C3R1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Brat1Q8C3R1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.51■□□□□ 0.87
Brat1Q8C3R1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Gm10493-201ENSMUST00000097270 612 ntBASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.51■□□□□ 0.87
Brat1Q8C3R1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brat1Q8C3R1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brat1Q8C3R1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brat1Q8C3R1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brat1Q8C3R1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Brat1Q8C3R1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brat1Q8C3R1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Brat1Q8C3R1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Brat1Q8C3R1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Brat1Q8C3R1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Brat1Q8C3R1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.49■□□□□ 0.87
Brat1Q8C3R1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Brat1Q8C3R1 Gm5874-201ENSMUST00000096101 508 ntBASIC20.49■□□□□ 0.87
Brat1Q8C3R1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Brat1Q8C3R1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Brat1Q8C3R1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Brat1Q8C3R1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Gm8495-201ENSMUST00000188740 694 ntBASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.48■□□□□ 0.87
Brat1Q8C3R1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.47■□□□□ 0.87
Brat1Q8C3R1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brat1Q8C3R1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Brat1Q8C3R1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Brat1Q8C3R1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.47■□□□□ 0.87
Brat1Q8C3R1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brat1Q8C3R1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brat1Q8C3R1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brat1Q8C3R1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brat1Q8C3R1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Brat1Q8C3R1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brat1Q8C3R1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms