Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Cps1Q8C196 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Cps1Q8C196 Gm27275-201ENSMUST00000184318 272 ntBASIC26.7■■□□□ 1.87
Cps1Q8C196 Mir7071-201ENSMUST00000184847 69 ntBASIC26.7■■□□□ 1.87
Cps1Q8C196 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cps1Q8C196 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC26.7■■□□□ 1.86
Cps1Q8C196 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cps1Q8C196 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cps1Q8C196 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC26.7■■□□□ 1.86
Cps1Q8C196 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC26.7■■□□□ 1.86
Cps1Q8C196 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Cps1Q8C196 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cps1Q8C196 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cps1Q8C196 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cps1Q8C196 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cps1Q8C196 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cps1Q8C196 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC26.69■■□□□ 1.86
Cps1Q8C196 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC26.69■■□□□ 1.86
Cps1Q8C196 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cps1Q8C196 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Cps1Q8C196 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cps1Q8C196 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cps1Q8C196 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Cps1Q8C196 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Cps1Q8C196 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cps1Q8C196 Gm37563-201ENSMUST00000192580 1513 ntBASIC26.67■■□□□ 1.86
Cps1Q8C196 AC131586.2-201ENSMUST00000228370 1512 ntBASIC26.67■■□□□ 1.86
Cps1Q8C196 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cps1Q8C196 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cps1Q8C196 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC26.67■■□□□ 1.86
Cps1Q8C196 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cps1Q8C196 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cps1Q8C196 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cps1Q8C196 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cps1Q8C196 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cps1Q8C196 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Cps1Q8C196 Gm27032-201ENSMUST00000183124 1116 ntBASIC26.66■■□□□ 1.86
Cps1Q8C196 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cps1Q8C196 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cps1Q8C196 Gm13181-201ENSMUST00000120117 1069 ntBASIC26.65■■□□□ 1.86
Cps1Q8C196 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC26.65■■□□□ 1.86
Cps1Q8C196 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC26.65■■□□□ 1.86
Cps1Q8C196 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Cps1Q8C196 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cps1Q8C196 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cps1Q8C196 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cps1Q8C196 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cps1Q8C196 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Cps1Q8C196 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC26.65■■□□□ 1.86
Cps1Q8C196 Gm29241-201ENSMUST00000189260 1096 ntBASIC26.65■■□□□ 1.86
Cps1Q8C196 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cps1Q8C196 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cps1Q8C196 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cps1Q8C196 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Cps1Q8C196 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cps1Q8C196 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cps1Q8C196 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cps1Q8C196 Cdkn3-203ENSMUST00000227149 1952 ntBASIC26.63■■□□□ 1.85
Cps1Q8C196 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cps1Q8C196 Gm44672-201ENSMUST00000206944 1098 ntBASIC26.63■■□□□ 1.85
Cps1Q8C196 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cps1Q8C196 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Cps1Q8C196 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Cps1Q8C196 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cps1Q8C196 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cps1Q8C196 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC26.62■■□□□ 1.85
Cps1Q8C196 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cps1Q8C196 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cps1Q8C196 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cps1Q8C196 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Cps1Q8C196 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Cps1Q8C196 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC26.61■■□□□ 1.85
Cps1Q8C196 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
Cps1Q8C196 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cps1Q8C196 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cps1Q8C196 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC26.6■■□□□ 1.85
Cps1Q8C196 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cps1Q8C196 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Cps1Q8C196 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cps1Q8C196 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Cps1Q8C196 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Cps1Q8C196 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Cps1Q8C196 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC26.6■■□□□ 1.85
Cps1Q8C196 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Cps1Q8C196 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Cps1Q8C196 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC26.6■■□□□ 1.85
Cps1Q8C196 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cps1Q8C196 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cps1Q8C196 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cps1Q8C196 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cps1Q8C196 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cps1Q8C196 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cps1Q8C196 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Cps1Q8C196 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC26.59■■□□□ 1.85
Cps1Q8C196 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Cps1Q8C196 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Cps1Q8C196 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cps1Q8C196 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC26.59■■□□□ 1.85
Cps1Q8C196 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC26.59■■□□□ 1.85
Cps1Q8C196 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms