Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf3Q8C120 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3rf3Q8C120 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3rf3Q8C120 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.25■□□□□ 0.83
Sh3rf3Q8C120 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.25■□□□□ 0.83
Sh3rf3Q8C120 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Sh3rf3Q8C120 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3rf3Q8C120 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.25■□□□□ 0.83
Sh3rf3Q8C120 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Gm45417-201ENSMUST00000209533 758 ntBASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf3Q8C120 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Mir7075-201ENSMUST00000184187 82 ntBASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf3Q8C120 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.22■□□□□ 0.83
Sh3rf3Q8C120 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf3Q8C120 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf3Q8C120 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf3Q8C120 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf3Q8C120 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
Sh3rf3Q8C120 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Sh3rf3Q8C120 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf3Q8C120 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf3Q8C120 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Sh3rf3Q8C120 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf3Q8C120 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3rf3Q8C120 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3rf3Q8C120 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3rf3Q8C120 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3rf3Q8C120 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3rf3Q8C120 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3rf3Q8C120 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3rf3Q8C120 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Gm12821-201ENSMUST00000120022 600 ntBASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf3Q8C120 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf3Q8C120 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf3Q8C120 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3rf3Q8C120 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3rf3Q8C120 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3rf3Q8C120 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms