Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SprnQ8BWU1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SprnQ8BWU1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.25■□□□□ 0.35
SprnQ8BWU1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.25■□□□□ 0.35
SprnQ8BWU1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SprnQ8BWU1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.24■□□□□ 0.35
SprnQ8BWU1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Mir6236-201ENSMUST00000184437 123 ntBASIC17.24■□□□□ 0.35
SprnQ8BWU1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.24■□□□□ 0.35
SprnQ8BWU1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SprnQ8BWU1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SprnQ8BWU1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SprnQ8BWU1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SprnQ8BWU1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SprnQ8BWU1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SprnQ8BWU1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.23■□□□□ 0.35
SprnQ8BWU1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SprnQ8BWU1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SprnQ8BWU1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
SprnQ8BWU1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SprnQ8BWU1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SprnQ8BWU1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SprnQ8BWU1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SprnQ8BWU1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SprnQ8BWU1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SprnQ8BWU1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.21■□□□□ 0.35
SprnQ8BWU1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SprnQ8BWU1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SprnQ8BWU1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SprnQ8BWU1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SprnQ8BWU1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SprnQ8BWU1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SprnQ8BWU1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SprnQ8BWU1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SprnQ8BWU1 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.19■□□□□ 0.34
SprnQ8BWU1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SprnQ8BWU1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.19■□□□□ 0.34
SprnQ8BWU1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SprnQ8BWU1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SprnQ8BWU1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SprnQ8BWU1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SprnQ8BWU1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.19■□□□□ 0.34
SprnQ8BWU1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.19■□□□□ 0.34
SprnQ8BWU1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SprnQ8BWU1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SprnQ8BWU1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SprnQ8BWU1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SprnQ8BWU1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.18■□□□□ 0.34
SprnQ8BWU1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.18■□□□□ 0.34
SprnQ8BWU1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.18■□□□□ 0.34
SprnQ8BWU1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SprnQ8BWU1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SprnQ8BWU1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SprnQ8BWU1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms