Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp43Q8BUM9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp43Q8BUM9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp43Q8BUM9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp43Q8BUM9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.75■□□□□ 0.75
Usp43Q8BUM9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp43Q8BUM9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Usp43Q8BUM9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Usp43Q8BUM9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp43Q8BUM9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp43Q8BUM9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Usp43Q8BUM9 Gm43173-201ENSMUST00000202246 593 ntBASIC19.75■□□□□ 0.75
Usp43Q8BUM9 Gm45417-201ENSMUST00000209533 758 ntBASIC19.75■□□□□ 0.75
Usp43Q8BUM9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.75■□□□□ 0.75
Usp43Q8BUM9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp43Q8BUM9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp43Q8BUM9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp43Q8BUM9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.74■□□□□ 0.75
Usp43Q8BUM9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp43Q8BUM9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp43Q8BUM9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp43Q8BUM9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp43Q8BUM9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp43Q8BUM9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp43Q8BUM9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp43Q8BUM9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp43Q8BUM9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.73■□□□□ 0.75
Usp43Q8BUM9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.73■□□□□ 0.75
Usp43Q8BUM9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.73■□□□□ 0.75
Usp43Q8BUM9 Gm6139-201ENSMUST00000079261 882 ntBASIC19.73■□□□□ 0.75
Usp43Q8BUM9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp43Q8BUM9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Usp43Q8BUM9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Usp43Q8BUM9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp43Q8BUM9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Usp43Q8BUM9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp43Q8BUM9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp43Q8BUM9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp43Q8BUM9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp43Q8BUM9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp43Q8BUM9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.71■□□□□ 0.75
Usp43Q8BUM9 Smad6-203ENSMUST00000179458 273 ntBASIC19.71■□□□□ 0.75
Usp43Q8BUM9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp43Q8BUM9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp43Q8BUM9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp43Q8BUM9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp43Q8BUM9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp43Q8BUM9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp43Q8BUM9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp43Q8BUM9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp43Q8BUM9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.7■□□□□ 0.74
Usp43Q8BUM9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp43Q8BUM9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp43Q8BUM9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp43Q8BUM9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.7■□□□□ 0.74
Usp43Q8BUM9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp43Q8BUM9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp43Q8BUM9 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.69■□□□□ 0.74
Usp43Q8BUM9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Usp43Q8BUM9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp43Q8BUM9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.69■□□□□ 0.74
Usp43Q8BUM9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp43Q8BUM9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp43Q8BUM9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp43Q8BUM9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp43Q8BUM9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp43Q8BUM9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp43Q8BUM9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp43Q8BUM9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp43Q8BUM9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp43Q8BUM9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp43Q8BUM9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Usp43Q8BUM9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp43Q8BUM9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp43Q8BUM9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp43Q8BUM9 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.66■□□□□ 0.74
Usp43Q8BUM9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp43Q8BUM9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp43Q8BUM9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp43Q8BUM9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp43Q8BUM9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp43Q8BUM9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp43Q8BUM9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usp43Q8BUM9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp43Q8BUM9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp43Q8BUM9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp43Q8BUM9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp43Q8BUM9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp43Q8BUM9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms