Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cc2d1bQ8BRN9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cc2d1bQ8BRN9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cc2d1bQ8BRN9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cc2d1bQ8BRN9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.45■■□□□ 1.03
Cc2d1bQ8BRN9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Cc2d1bQ8BRN9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cc2d1bQ8BRN9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cc2d1bQ8BRN9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cc2d1bQ8BRN9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cc2d1bQ8BRN9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cc2d1bQ8BRN9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cc2d1bQ8BRN9 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.45■■□□□ 1.02
Cc2d1bQ8BRN9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cc2d1bQ8BRN9 AA386476-201ENSMUST00000098781 1665 ntBASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cc2d1bQ8BRN9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.43■■□□□ 1.02
Cc2d1bQ8BRN9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cc2d1bQ8BRN9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cc2d1bQ8BRN9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cc2d1bQ8BRN9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cc2d1bQ8BRN9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Cc2d1bQ8BRN9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cc2d1bQ8BRN9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cc2d1bQ8BRN9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cc2d1bQ8BRN9 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.43■■□□□ 1.02
Cc2d1bQ8BRN9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cc2d1bQ8BRN9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cc2d1bQ8BRN9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.42■■□□□ 1.02
Cc2d1bQ8BRN9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cc2d1bQ8BRN9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
Cc2d1bQ8BRN9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.42■■□□□ 1.02
Cc2d1bQ8BRN9 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.42■■□□□ 1.02
Cc2d1bQ8BRN9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cc2d1bQ8BRN9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cc2d1bQ8BRN9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.42■■□□□ 1.02
Cc2d1bQ8BRN9 Iqck-206ENSMUST00000208658 2891 ntBASIC21.42■■□□□ 1.02
Cc2d1bQ8BRN9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cc2d1bQ8BRN9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.41■■□□□ 1.02
Cc2d1bQ8BRN9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cc2d1bQ8BRN9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cc2d1bQ8BRN9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cc2d1bQ8BRN9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cc2d1bQ8BRN9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Cc2d1bQ8BRN9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cc2d1bQ8BRN9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cc2d1bQ8BRN9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cc2d1bQ8BRN9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cc2d1bQ8BRN9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cc2d1bQ8BRN9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.4■■□□□ 1.02
Cc2d1bQ8BRN9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cc2d1bQ8BRN9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cc2d1bQ8BRN9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cc2d1bQ8BRN9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cc2d1bQ8BRN9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
Cc2d1bQ8BRN9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cc2d1bQ8BRN9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cc2d1bQ8BRN9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cc2d1bQ8BRN9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cc2d1bQ8BRN9 Gm13241-201ENSMUST00000094493 780 ntBASIC21.39■■□□□ 1.01
Cc2d1bQ8BRN9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cc2d1bQ8BRN9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Gm21956-201ENSMUST00000179946 522 ntBASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cc2d1bQ8BRN9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cc2d1bQ8BRN9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cc2d1bQ8BRN9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cc2d1bQ8BRN9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms