Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scfd1Q8BRF7 Gm38205-201ENSMUST00000192243 258 ntBASIC22.37■■□□□ 1.17
Scfd1Q8BRF7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Scfd1Q8BRF7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Scfd1Q8BRF7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scfd1Q8BRF7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Scfd1Q8BRF7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scfd1Q8BRF7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
Scfd1Q8BRF7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scfd1Q8BRF7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Scfd1Q8BRF7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scfd1Q8BRF7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Scfd1Q8BRF7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Scfd1Q8BRF7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Scfd1Q8BRF7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scfd1Q8BRF7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Scfd1Q8BRF7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Gm12933-201ENSMUST00000120203 872 ntBASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scfd1Q8BRF7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scfd1Q8BRF7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scfd1Q8BRF7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scfd1Q8BRF7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Scfd1Q8BRF7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scfd1Q8BRF7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.33■■□□□ 1.17
Scfd1Q8BRF7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.33■■□□□ 1.17
Scfd1Q8BRF7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scfd1Q8BRF7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scfd1Q8BRF7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scfd1Q8BRF7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Scfd1Q8BRF7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scfd1Q8BRF7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Scfd1Q8BRF7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Scfd1Q8BRF7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.31■■□□□ 1.16
Scfd1Q8BRF7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scfd1Q8BRF7 Gm10602-201ENSMUST00000098239 609 ntBASIC22.31■■□□□ 1.16
Scfd1Q8BRF7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Scfd1Q8BRF7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scfd1Q8BRF7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Scfd1Q8BRF7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scfd1Q8BRF7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Scfd1Q8BRF7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.3■■□□□ 1.16
Scfd1Q8BRF7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scfd1Q8BRF7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.3■■□□□ 1.16
Scfd1Q8BRF7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scfd1Q8BRF7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Scfd1Q8BRF7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scfd1Q8BRF7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Scfd1Q8BRF7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.29■■□□□ 1.16
Scfd1Q8BRF7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
Scfd1Q8BRF7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Scfd1Q8BRF7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Scfd1Q8BRF7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Scfd1Q8BRF7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scfd1Q8BRF7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Scfd1Q8BRF7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scfd1Q8BRF7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scfd1Q8BRF7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Scfd1Q8BRF7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.28■■□□□ 1.16
Scfd1Q8BRF7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.28■■□□□ 1.16
Scfd1Q8BRF7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Scfd1Q8BRF7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Scfd1Q8BRF7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.28■■□□□ 1.16
Scfd1Q8BRF7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms