Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cpne4Q8BLR2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cpne4Q8BLR2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne4Q8BLR2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
Cpne4Q8BLR2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cpne4Q8BLR2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cpne4Q8BLR2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cpne4Q8BLR2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Cpne4Q8BLR2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne4Q8BLR2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne4Q8BLR2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cpne4Q8BLR2 AA386476-201ENSMUST00000098781 1665 ntBASIC17.39■□□□□ 0.37
Cpne4Q8BLR2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne4Q8BLR2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.39■□□□□ 0.37
Cpne4Q8BLR2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne4Q8BLR2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne4Q8BLR2 Iqck-206ENSMUST00000208658 2891 ntBASIC17.39■□□□□ 0.37
Cpne4Q8BLR2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne4Q8BLR2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne4Q8BLR2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne4Q8BLR2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne4Q8BLR2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne4Q8BLR2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.37■□□□□ 0.37
Cpne4Q8BLR2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.37■□□□□ 0.37
Cpne4Q8BLR2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne4Q8BLR2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne4Q8BLR2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne4Q8BLR2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne4Q8BLR2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne4Q8BLR2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne4Q8BLR2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cpne4Q8BLR2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne4Q8BLR2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne4Q8BLR2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne4Q8BLR2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.35■□□□□ 0.37
Cpne4Q8BLR2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne4Q8BLR2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.35■□□□□ 0.37
Cpne4Q8BLR2 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.35■□□□□ 0.37
Cpne4Q8BLR2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne4Q8BLR2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.34■□□□□ 0.37
Cpne4Q8BLR2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne4Q8BLR2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne4Q8BLR2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne4Q8BLR2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne4Q8BLR2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne4Q8BLR2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne4Q8BLR2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne4Q8BLR2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne4Q8BLR2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.33■□□□□ 0.36
Cpne4Q8BLR2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne4Q8BLR2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne4Q8BLR2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne4Q8BLR2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne4Q8BLR2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms