Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4bQ8BGE6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4bQ8BGE6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4bQ8BGE6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4bQ8BGE6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4bQ8BGE6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.35■□□□□ 0.53
Atg4bQ8BGE6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4bQ8BGE6 Golph3-202ENSMUST00000226517 2359 ntBASIC18.34■□□□□ 0.53
Atg4bQ8BGE6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4bQ8BGE6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4bQ8BGE6 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.34■□□□□ 0.53
Atg4bQ8BGE6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4bQ8BGE6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4bQ8BGE6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg4bQ8BGE6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Atg4bQ8BGE6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg4bQ8BGE6 Smad6-203ENSMUST00000179458 273 ntBASIC18.33■□□□□ 0.52
Atg4bQ8BGE6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg4bQ8BGE6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.32■□□□□ 0.52
Atg4bQ8BGE6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4bQ8BGE6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4bQ8BGE6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.32■□□□□ 0.52
Atg4bQ8BGE6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4bQ8BGE6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Atg4bQ8BGE6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Atg4bQ8BGE6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4bQ8BGE6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4bQ8BGE6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4bQ8BGE6 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.31■□□□□ 0.52
Atg4bQ8BGE6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Atg4bQ8BGE6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Atg4bQ8BGE6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4bQ8BGE6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Atg4bQ8BGE6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Atg4bQ8BGE6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4bQ8BGE6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4bQ8BGE6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4bQ8BGE6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4bQ8BGE6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Atg4bQ8BGE6 Gm43017-201ENSMUST00000198296 752 ntBASIC18.29■□□□□ 0.52
Atg4bQ8BGE6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.29■□□□□ 0.52
Atg4bQ8BGE6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4bQ8BGE6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.29■□□□□ 0.52
Atg4bQ8BGE6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4bQ8BGE6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4bQ8BGE6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 Iqck-206ENSMUST00000208658 2891 ntBASIC18.28■□□□□ 0.52
Atg4bQ8BGE6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4bQ8BGE6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4bQ8BGE6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4bQ8BGE6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4bQ8BGE6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4bQ8BGE6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4bQ8BGE6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4bQ8BGE6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4bQ8BGE6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Atg4bQ8BGE6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4bQ8BGE6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.27■□□□□ 0.52
Atg4bQ8BGE6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Atg4bQ8BGE6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
Atg4bQ8BGE6 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.27■□□□□ 0.51
Atg4bQ8BGE6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4bQ8BGE6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4bQ8BGE6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.26■□□□□ 0.51
Atg4bQ8BGE6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4bQ8BGE6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4bQ8BGE6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms